RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 C5orf67F2Z3F1 127 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 PSCAO43653 123 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 KLF5Q13887 457 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-227ENST00000638011 ZFYVE26Q68DK2 2539 aa12.33□□□□□ -0.43
UBE3A-227ENST00000638011 CXCL5P42830 114 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 CDCP2Q5VXM1 449 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 J3QQQ9 107 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 NTN3O00634 580 aaPredicted RBP12.33□□□□□ -0.44
UBE3A-227ENST00000638011 IGLL1P15814 213 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 PPIFP30405 207 aaKnown RBP12.33□□□□□ -0.44
UBE3A-227ENST00000638011 C12orf74Q32Q52 190 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 LOC101059948A0A1B0GTJ6 334 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 ADCYAP1P18509 176 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 JMJD7-PLA2G4BH0Y9G9 81 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 ZNF493Q6ZR52 646 aa12.33□□□□□ -0.44
UBE3A-227ENST00000638011 COLCA1Q6ZS62 124 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 CCL3L1P16619 93 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 BDP1A6H8Y1 2624 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 RMI2Q96E14 147 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 HTN3P15516 51 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 PSMB8P28062 276 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 WFDC9Q8NEX5 89 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 CFHR4Q92496 578 aa12.32□□□□□ -0.44
UBE3A-227ENST00000638011 DAZ1Q9NQZ3 744 aaKnown RBP12.32□□□□□ -0.44
UBE3A-227ENST00000638011 THBDP07204 575 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 SCRT2Q9NQ03 307 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 NDUFC1O43677 76 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 BMPERQ8N8U9 685 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 PLA2G2FQ9BZM2 168 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 MUSTN1Q8IVN3 82 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 VSIRQ9H7M9 311 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 NRTNQ99748 197 aa12.31□□□□□ -0.44
UBE3A-227ENST00000638011 SRRM5B3KS81 715 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 BAALC-AS2P0C853 105 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 PCOLCEQ15113 449 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 CTSBP07858 339 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 CFC1BP0CG36 223 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 CFC1P0CG37 223 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
UBE3A-227ENST00000638011 TRAV12-1A0A0B4J245 112 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 SHANK2-AS3Q9BTD1 123 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 M0R1W7 72 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 IGFBP6P24592 240 aaPredicted RBP12.3□□□□□ -0.44
UBE3A-227ENST00000638011 UBE2BP63146 152 aa12.3□□□□□ -0.44
UBE3A-227ENST00000638011 ZCCHC24Q8N2G6 241 aaKnown RBP12.3□□□□□ -0.44
UBE3A-227ENST00000638011 FAM216BQ8N7L0 139 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 TMEM14CQ9P0S9 112 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 COA6Q5JTJ3 125 aaKnown RBP12.29□□□□□ -0.44
UBE3A-227ENST00000638011 TEX48A0A1B0GUV7 120 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 RPL15P61313 204 aaKnown RBP12.29□□□□□ -0.44
UBE3A-227ENST00000638011 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
UBE3A-227ENST00000638011 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 SELENOKQ9Y6D0 94 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 S4R3C0 116 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 ZNF462Q96JM2 2506 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 E9PQ18 207 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 SMRP1Q8NCR6 262 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 SMIM2Q9BVW6 85 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 ARMS2P0C7Q2 107 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
UBE3A-227ENST00000638011 UQCRQO14949 82 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 NDUFB1O75438 58 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 LCNL1Q6ZST4 164 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 DSCR9P59020 149 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 BAALCQ8WXS3 180 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 SLC22A18ASQ8N1D0 253 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 C7orf69Q9H7B7 122 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 FAM240AA0A1B0GVK7 77 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 CELA3AP09093 270 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 LINC01565O15544 149 aa12.28□□□□□ -0.44
UBE3A-227ENST00000638011 IGKV1-9A0A0C4DH69 117 aa12.27□□□□□ -0.44
UBE3A-227ENST00000638011 IGLC7A0M8Q6 106 aa12.27□□□□□ -0.44
UBE3A-227ENST00000638011 K7ERS5 55 aa12.27□□□□□ -0.44
UBE3A-227ENST00000638011 UBE2DNLQ8IWF7 75 aa12.27□□□□□ -0.44
UBE3A-227ENST00000638011 H3BT86 120 aa12.27□□□□□ -0.44
UBE3A-227ENST00000638011 CCL25O15444 150 aa12.27□□□□□ -0.45
UBE3A-227ENST00000638011 MST1P26927 711 aa12.27□□□□□ -0.45
UBE3A-227ENST00000638011 CFHR2P36980 270 aa12.27□□□□□ -0.45
UBE3A-227ENST00000638011 PTPRSQ13332 1948 aa12.27□□□□□ -0.45
UBE3A-227ENST00000638011 A0A0A6YYD4 124 aa12.27□□□□□ -0.45
UBE3A-227ENST00000638011 G3V4G9 280 aa12.27□□□□□ -0.45
UBE3A-227ENST00000638011 DUX4L9Q6RFH8 374 aaPredicted RBP12.27□□□□□ -0.45
UBE3A-227ENST00000638011 COL11A2P13942 1736 aaPredicted RBP12.26□□□□□ -0.45
UBE3A-227ENST00000638011 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
UBE3A-227ENST00000638011 V9GYV3 84 aa12.26□□□□□ -0.45
UBE3A-227ENST00000638011 C15orf62A8K5M9 175 aa12.26□□□□□ -0.45
UBE3A-227ENST00000638011 ATP5EP2Q5VTU8 51 aa12.26□□□□□ -0.45
UBE3A-227ENST00000638011 MRPL35Q9NZE8 188 aaKnown RBP12.26□□□□□ -0.45
UBE3A-227ENST00000638011 TLN2Q9Y4G6 2542 aa12.25□□□□□ -0.45
UBE3A-227ENST00000638011 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
UBE3A-227ENST00000638011 BRWD3Q6RI45 1802 aa12.25□□□□□ -0.45
UBE3A-227ENST00000638011 C9JQL5 133 aa12.25□□□□□ -0.45
UBE3A-227ENST00000638011 IGKV1-5P01602 117 aa12.25□□□□□ -0.45
UBE3A-227ENST00000638011 C8orf31Q8N9H6 132 aa12.25□□□□□ -0.45
UBE3A-227ENST00000638011 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
UBE3A-227ENST00000638011 NDUFS5O43920 106 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms