RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 TMEM183AQ8IXX5 376 aa8.82□□□□□ -1
CLN6-223ENST00000637823 OR10J6PQ8NGY7 276 aa8.82□□□□□ -1
CLN6-223ENST00000637823 ANAPC16Q96DE5 110 aa8.82□□□□□ -1
CLN6-223ENST00000637823 LINC00477Q96M19 166 aa8.82□□□□□ -1
CLN6-223ENST00000637823 SPAG8Q99932 426 aaPredicted RBP8.82□□□□□ -1
CLN6-223ENST00000637823 CTDSP1Q9GZU7 261 aa8.82□□□□□ -1
CLN6-223ENST00000637823 AGPAT4-IT1Q9H0P7 198 aa8.82□□□□□ -1
CLN6-223ENST00000637823 PPP1R14DQ9NXH3 145 aa8.82□□□□□ -1
CLN6-223ENST00000637823 OR4C46A6NHA9 309 aa8.81□□□□□ -1
CLN6-223ENST00000637823 PPP1R2P9O14990 202 aa8.81□□□□□ -1
CLN6-223ENST00000637823 SCO1O75880 301 aa8.81□□□□□ -1
CLN6-223ENST00000637823 IGLV1-51P01701 117 aa8.81□□□□□ -1
CLN6-223ENST00000637823 ZNF688P0C7X2 276 aa8.81□□□□□ -1
CLN6-223ENST00000637823 PRB4P10163 310 aaPredicted RBP8.81□□□□□ -1
CLN6-223ENST00000637823 MGST1P10620 155 aaKnown RBP8.81□□□□□ -1
CLN6-223ENST00000637823 ZNF138P52744 262 aa8.81□□□□□ -1
CLN6-223ENST00000637823 RNF212Q495C1 297 aa8.81□□□□□ -1
CLN6-223ENST00000637823 SHISA2Q6UWI4 295 aa8.81□□□□□ -1
CLN6-223ENST00000637823 C12orf54Q6X4T0 127 aa8.81□□□□□ -1
CLN6-223ENST00000637823 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
CLN6-223ENST00000637823 OR8A1Q8NGG7 326 aa8.81□□□□□ -1
CLN6-223ENST00000637823 SFRP2Q96HF1 295 aa8.81□□□□□ -1
CLN6-223ENST00000637823 TMEM242Q9NWH2 141 aa8.81□□□□□ -1
CLN6-223ENST00000637823 FBN1P35555 2871 aaKnown RBP8.81□□□□□ -1
CLN6-223ENST00000637823 DNHD1Q96M86 4753 aa8.81□□□□□ -1
CLN6-223ENST00000637823 IZUMO1RA6ND01 250 aa8.8□□□□□ -1
CLN6-223ENST00000637823 NPIPB6E9PJ23 425 aa8.8□□□□□ -1
CLN6-223ENST00000637823 INSL3P51460 131 aa8.8□□□□□ -1
CLN6-223ENST00000637823 CMC4P56277 68 aaPredicted RBP8.8□□□□□ -1
CLN6-223ENST00000637823 OR5I1Q13606 314 aa8.8□□□□□ -1
CLN6-223ENST00000637823 PSMG4Q5JS54 123 aa8.8□□□□□ -1
CLN6-223ENST00000637823 COX8CQ7Z4L0 72 aa8.8□□□□□ -1
CLN6-223ENST00000637823 FAM24BQ8N5W8 94 aa8.8□□□□□ -1
CLN6-223ENST00000637823 C15orf54Q8N8G6 183 aa8.8□□□□□ -1
CLN6-223ENST00000637823 OR10G8Q8NGN5 311 aa8.8□□□□□ -1
CLN6-223ENST00000637823 PRR25Q96S07 402 aa8.8□□□□□ -1
CLN6-223ENST00000637823 NDFIP1Q9BT67 221 aa8.8□□□□□ -1
CLN6-223ENST00000637823 OSTCQ9NRP0 149 aa8.8□□□□□ -1
CLN6-223ENST00000637823 SMCO4Q9NRQ5 59 aa8.8□□□□□ -1
CLN6-223ENST00000637823 ZNF492Q9P255 531 aa8.8□□□□□ -1
CLN6-223ENST00000637823 LENEPQ9Y5L5 61 aa8.8□□□□□ -1
CLN6-223ENST00000637823 AGRNO00468 2067 aa8.79□□□□□ -1
CLN6-223ENST00000637823 ERVFC1-1P60608 527 aa8.79□□□□□ -1
CLN6-223ENST00000637823 BTN1A1Q13410 526 aa8.79□□□□□ -1
CLN6-223ENST00000637823 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
CLN6-223ENST00000637823 MCRIP2Q9BUT9 160 aaKnown RBP8.79□□□□□ -1
CLN6-223ENST00000637823 ZNF256Q9Y2P7 627 aaPredicted RBP8.79□□□□□ -1
CLN6-223ENST00000637823 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
CLN6-223ENST00000637823 A0A0J9YX75 114 aa8.78□□□□□ -1
CLN6-223ENST00000637823 CXorf65A6NEN9 183 aa8.78□□□□□ -1
CLN6-223ENST00000637823 H7BYZ3 331 aa8.78□□□□□ -1
CLN6-223ENST00000637823 DUSP14O95147 198 aaKnown RBP8.78□□□□□ -1
CLN6-223ENST00000637823 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
CLN6-223ENST00000637823 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
CLN6-223ENST00000637823 HIST1H1AQ02539 215 aaPredicted RBP8.78□□□□□ -1
CLN6-223ENST00000637823 SMUG1Q53HV7 270 aa8.78□□□□□ -1
CLN6-223ENST00000637823 IBA57Q5T440 356 aaKnown RBP8.78□□□□□ -1
CLN6-223ENST00000637823 C9orf66Q5T8R8 295 aa8.78□□□□□ -1
CLN6-223ENST00000637823 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
CLN6-223ENST00000637823 FOXI2Q6ZQN5 318 aa8.78□□□□□ -1
CLN6-223ENST00000637823 WFDC9Q8NEX5 89 aa8.78□□□□□ -1
CLN6-223ENST00000637823 DAZAP1Q96EP5 407 aaKnown RBP8.78□□□□□ -1
CLN6-223ENST00000637823 ZC2HC1AQ96GY0 325 aa8.78□□□□□ -1
CLN6-223ENST00000637823 C8orf49Q96NF6 230 aa8.78□□□□□ -1
CLN6-223ENST00000637823 SAV1Q9H4B6 383 aaPredicted RBP8.78□□□□□ -1
CLN6-223ENST00000637823 TUBA4BQ9H853 241 aa8.78□□□□□ -1
CLN6-223ENST00000637823 FBN3Q75N90 2809 aa8.77□□□□□ -1
CLN6-223ENST00000637823 F6UB75 175 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 CT45A10P0DMU9 189 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 CD33P20138 364 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 RIPPLY3P57055 190 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 DEFB131AP59861 70 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 DEFB1P60022 68 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 PRR27Q6MZM9 219 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 NUDT10Q8NFP7 164 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 Q8TAT8 98 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 NUDT11Q96G61 164 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 ASCL2Q99929 193 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 GPR61Q9BZJ8 451 aa8.77□□□□□ -1.01
CLN6-223ENST00000637823 RNASE7Q9H1E1 156 aaKnown RBP8.77□□□□□ -1.01
CLN6-223ENST00000637823 VWFP04275 2813 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 C19orf71A6NCJ1 209 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
CLN6-223ENST00000637823 BEAN1Q3B7T3 259 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 FAM162BQ5T6X4 162 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 TMEM88Q6PEY1 159 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 CBLN2Q8IUK8 224 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 FAM19A4Q96LR4 140 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 ODF3Q96PU9 254 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 MAP6D1Q9H9H5 199 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 V9GYV3 84 aa8.76□□□□□ -1.01
CLN6-223ENST00000637823 FABP5P3A8MUU1 101 aa8.75□□□□□ -1.01
CLN6-223ENST00000637823 ZNF705GA8MUZ8 300 aaPredicted RBP8.75□□□□□ -1.01
CLN6-223ENST00000637823 P01737 135 aa8.75□□□□□ -1.01
CLN6-223ENST00000637823 CRISP2P16562 243 aa8.75□□□□□ -1.01
CLN6-223ENST00000637823 CRIP1P50238 77 aa8.75□□□□□ -1.01
CLN6-223ENST00000637823 GDF5OSQ5U4N7 250 aa8.75□□□□□ -1.01
CLN6-223ENST00000637823 LINC00322Q6ZN03 302 aaPredicted RBP8.75□□□□□ -1.01
CLN6-223ENST00000637823 OR4B1Q8NGF8 309 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms