RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CITED1Q99966 193 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 NDFIP1Q9BT67 221 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 OSTCQ9NRP0 149 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 PPP1R14DQ9NXH3 145 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 MGST1P10620 155 aaKnown RBP11.55□□□□□ -0.56
CLN6-219ENST00000637329 HIST2H2BDQ6DRA6 164 aa11.55□□□□□ -0.56
CLN6-219ENST00000637329 C9orf47Q6ZRZ4 202 aa11.55□□□□□ -0.56
CLN6-219ENST00000637329 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
CLN6-219ENST00000637329 ZNF492Q9P255 531 aa11.55□□□□□ -0.56
CLN6-219ENST00000637329 ZNF705FA8MVS1 300 aaPredicted RBP11.54□□□□□ -0.56
CLN6-219ENST00000637329 NPIPB6E9PJ23 425 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 IBA57Q5T440 356 aaKnown RBP11.54□□□□□ -0.56
CLN6-219ENST00000637329 TMEM78Q5T7P6 136 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 C12orf54Q6X4T0 127 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
CLN6-219ENST00000637329 NHLRC2Q8NBF2 726 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 OR10G8Q8NGN5 311 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 C20orf173Q96LM9 149 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 AURKAIP1Q9NWT8 199 aaPredicted RBP11.54□□□□□ -0.56
CLN6-219ENST00000637329 LENEPQ9Y5L5 61 aa11.54□□□□□ -0.56
CLN6-219ENST00000637329 IGKV3-7A0A075B6H7 116 aa11.53□□□□□ -0.56
CLN6-219ENST00000637329 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
CLN6-219ENST00000637329 PF4P02776 101 aa11.53□□□□□ -0.56
CLN6-219ENST00000637329 ERVFC1-1P60608 527 aa11.53□□□□□ -0.56
CLN6-219ENST00000637329 OR2K2Q8NGT1 345 aa11.53□□□□□ -0.56
CLN6-219ENST00000637329 OR10J6PQ8NGY7 276 aa11.53□□□□□ -0.56
CLN6-219ENST00000637329 SGK494Q96LW2 274 aa11.53□□□□□ -0.56
CLN6-219ENST00000637329 SPAG8Q99932 426 aaPredicted RBP11.53□□□□□ -0.56
CLN6-219ENST00000637329 TRBV7-9A0A0J9YWB2 115 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 S100PP25815 95 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 ZNF138P52744 262 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 OR5I1Q13606 314 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 DEFB114Q30KQ6 69 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 TMEM61Q8N0U2 210 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 PRR25Q96S07 402 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 VGLL1Q99990 258 aa11.52□□□□□ -0.57
CLN6-219ENST00000637329 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 OR4C46A6NHA9 309 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 CT83Q5H943 113 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 LINC00482Q8N8I6 264 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 OR4B1Q8NGF8 309 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 YPEL4Q96NS1 127 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 V9GYV3 84 aa11.51□□□□□ -0.57
CLN6-219ENST00000637329 TRAV9-1A0A075B6T8 112 aa11.5□□□□□ -0.57
CLN6-219ENST00000637329 PRR27Q6MZM9 219 aa11.5□□□□□ -0.57
CLN6-219ENST00000637329 Q8TAT8 98 aa11.5□□□□□ -0.57
CLN6-219ENST00000637329 BTF3L4Q96K17 158 aa11.5□□□□□ -0.57
CLN6-219ENST00000637329 RNASE7Q9H1E1 156 aaKnown RBP11.5□□□□□ -0.57
CLN6-219ENST00000637329 MEGF8Q7Z7M0 2845 aa11.5□□□□□ -0.57
CLN6-219ENST00000637329 SAP30O75446 220 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 P01737 135 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 TFPI2P48307 235 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 ERCC8Q13216 396 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 ELOBQ15370 118 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 CD300EQ496F6 205 aaPredicted RBP11.49□□□□□ -0.57
CLN6-219ENST00000637329 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 WFDC3Q8IUB2 231 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 DAZAP1Q96EP5 407 aaKnown RBP11.49□□□□□ -0.57
CLN6-219ENST00000637329 ODF3Q96PU9 254 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 IL36BQ9NZH7 164 aa11.49□□□□□ -0.57
CLN6-219ENST00000637329 TRBV24-1A0A075B6N3 115 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
CLN6-219ENST00000637329 GATCO43716 136 aaKnown RBP11.48□□□□□ -0.57
CLN6-219ENST00000637329 IGLV1-51P01701 117 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
CLN6-219ENST00000637329 HIST1H1AQ02539 215 aaPredicted RBP11.48□□□□□ -0.57
CLN6-219ENST00000637329 FAM162BQ5T6X4 162 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 FOXI2Q6ZQN5 318 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 FAM24BQ8N5W8 94 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 NUDT10Q8NFP7 164 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 NUDT11Q96G61 164 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 GPR61Q9BZJ8 451 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
CLN6-219ENST00000637329 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
CLN6-219ENST00000637329 A0A0J9YX75 114 aa11.47□□□□□ -0.57
CLN6-219ENST00000637329 COLCA2A8K830 154 aa11.47□□□□□ -0.57
CLN6-219ENST00000637329 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
CLN6-219ENST00000637329 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.47□□□□□ -0.57
CLN6-219ENST00000637329 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
CLN6-219ENST00000637329 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
CLN6-219ENST00000637329 URGCP-MRPS24S4R325 110 aa11.47□□□□□ -0.57
CLN6-219ENST00000637329 TGP01266 2768 aa11.47□□□□□ -0.57
CLN6-219ENST00000637329 PKD1L1Q8TDX9 2849 aa11.46□□□□□ -0.57
CLN6-219ENST00000637329 FAM231BA6NCW3 169 aa11.46□□□□□ -0.57
CLN6-219ENST00000637329 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.57
CLN6-219ENST00000637329 CRISP2P16562 243 aa11.46□□□□□ -0.57
CLN6-219ENST00000637329 INSL3P51460 131 aa11.46□□□□□ -0.57
CLN6-219ENST00000637329 APRG1Q8IVJ8 170 aa11.46□□□□□ -0.57
CLN6-219ENST00000637329 PYGO2Q9BRQ0 406 aa11.46□□□□□ -0.57
CLN6-219ENST00000637329 ZNF747Q9BV97 191 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms