RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
CLN6-218ENST00000637223 SUN5Q8TC36 379 aa12.54□□□□□ -0.4
CLN6-218ENST00000637223 A0A1B0GV50 99 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 M0R2Z0 102 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 NDUFS6O75380 124 aaKnown RBP12.53□□□□□ -0.4
CLN6-218ENST00000637223 CSN1S1P47710 185 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 SLC7A5P1Q8MH63 180 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 SFT2D1Q8WV19 159 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 PCNPQ8WW12 178 aaKnown RBP12.53□□□□□ -0.4
CLN6-218ENST00000637223 C1QTNF4Q9BXJ3 329 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 RPH3ALQ9UNE2 315 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 AGRNO00468 2067 aa12.53□□□□□ -0.4
CLN6-218ENST00000637223 PPT1P50897 306 aa12.52□□□□□ -0.41
CLN6-218ENST00000637223 UBE2G2P60604 165 aa12.52□□□□□ -0.41
CLN6-218ENST00000637223 CSNK1G2-AS1Q8NCQ2 148 aa12.52□□□□□ -0.41
CLN6-218ENST00000637223 CMTM2Q8TAZ6 248 aa12.52□□□□□ -0.41
CLN6-218ENST00000637223 KRTAP17-1Q9BYP8 105 aa12.52□□□□□ -0.41
CLN6-218ENST00000637223 ATP6V1G1O75348 118 aa12.51□□□□□ -0.41
CLN6-218ENST00000637223 CT45A10P0DMU9 189 aa12.51□□□□□ -0.41
CLN6-218ENST00000637223 OR11H2Q8NH07 326 aa12.51□□□□□ -0.41
CLN6-218ENST00000637223 RXFP4Q8TDU9 374 aa12.51□□□□□ -0.41
CLN6-218ENST00000637223 RARRES2Q99969 163 aa12.51□□□□□ -0.41
CLN6-218ENST00000637223 VGLL1Q99990 258 aa12.51□□□□□ -0.41
CLN6-218ENST00000637223 TRAV12-2A0A075B6T6 113 aa12.5□□□□□ -0.41
CLN6-218ENST00000637223 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
CLN6-218ENST00000637223 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
CLN6-218ENST00000637223 SLC25A5P05141 298 aaKnown RBP12.5□□□□□ -0.41
CLN6-218ENST00000637223 GNG5P63218 68 aa12.5□□□□□ -0.41
CLN6-218ENST00000637223 FAM210AQ96ND0 272 aa12.5□□□□□ -0.41
CLN6-218ENST00000637223 AGPAT4-IT1Q9H0P7 198 aa12.5□□□□□ -0.41
CLN6-218ENST00000637223 YTHDF2Q9Y5A9 579 aaKnown RBP12.5□□□□□ -0.41
CLN6-218ENST00000637223 IGHV3OR16-12A0A075B7B8 117 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 C3orf84H3BNL1 204 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 J3KRW8 73 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 CRXO43186 299 aaPredicted RBP12.49□□□□□ -0.41
CLN6-218ENST00000637223 IFNA1P01562 189 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 AMBPP02760 352 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 SUMO1P63165 101 aaKnown RBP12.49□□□□□ -0.41
CLN6-218ENST00000637223 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 IGF2BP2-AS1Q96M15 143 aa12.49□□□□□ -0.41
CLN6-218ENST00000637223 TENM2Q9NT68 2774 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 A0A1W2PRE2 83 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 INSP01308 110 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 CDKN1BP46527 198 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 PEA15Q15121 130 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 GOLT1AQ6ZVE7 132 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 LINC00477Q96M19 166 aa12.48□□□□□ -0.41
CLN6-218ENST00000637223 FAM74A7A6NL05 159 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 KRBOX1C9JBD0 128 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 TSPOP30536 169 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 LEPP41159 167 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 C1orf158Q8N1D5 194 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 C5orf17Q8NAS9 161 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 Q8TAT8 98 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 ODF3Q96PU9 254 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 TXNDC17Q9BRA2 123 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 MANBALQ9NQG1 85 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 GOLT1BQ9Y3E0 138 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 X6R8D5 127 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 RYR2Q92736 4967 aa12.47□□□□□ -0.41
CLN6-218ENST00000637223 RBAKDNA6NC62 111 aa12.46□□□□□ -0.41
CLN6-218ENST00000637223 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.41
CLN6-218ENST00000637223 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.41
CLN6-218ENST00000637223 ZNF138P52744 262 aa12.46□□□□□ -0.41
CLN6-218ENST00000637223 RBMY1FQ15415 496 aaKnown RBP12.46□□□□□ -0.41
CLN6-218ENST00000637223 ZNF705AQ6ZN79 300 aaPredicted RBP12.46□□□□□ -0.41
CLN6-218ENST00000637223 ZNF492Q9P255 531 aa12.46□□□□□ -0.41
CLN6-218ENST00000637223 EPDR1Q9UM22 224 aa12.46□□□□□ -0.41
CLN6-218ENST00000637223 TRAV8-1A0A0A6YYK1 113 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 DEFB4AO15263 64 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 TCRAP04437 139 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 CCL20P78556 96 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 ZNF506Q5JVG8 444 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 GFI1BQ5VTD9 330 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 CST9LP1Q5W188 147 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 ARL6IP6Q8N6S5 226 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 FAM19A4Q96LR4 140 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 SGK494Q96LW2 274 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 TMEM208Q9BTX3 173 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 EDA2RQ9HAV5 297 aa12.45□□□□□ -0.42
CLN6-218ENST00000637223 PAGE4O60829 102 aa12.44□□□□□ -0.42
CLN6-218ENST00000637223 IGHV4-28A0A0C4DH34 117 aa12.43□□□□□ -0.42
CLN6-218ENST00000637223 BCL2P10415 239 aa12.43□□□□□ -0.42
CLN6-218ENST00000637223 MIFP14174 115 aa12.43□□□□□ -0.42
CLN6-218ENST00000637223 ATP5G3P48201 142 aa12.43□□□□□ -0.42
CLN6-218ENST00000637223 Q8NAQ8 132 aa12.43□□□□□ -0.42
CLN6-218ENST00000637223 NKX6-2Q9C056 277 aaPredicted RBP12.43□□□□□ -0.42
CLN6-218ENST00000637223 EIF5A2Q9GZV4 153 aaKnown RBP12.43□□□□□ -0.42
CLN6-218ENST00000637223 GNG13Q9P2W3 67 aa12.43□□□□□ -0.42
CLN6-218ENST00000637223 VAX2Q9UIW0 290 aa12.43□□□□□ -0.42
CLN6-218ENST00000637223 TRAV12-3A0A0B4J271 114 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 LOC102723971A0A1B0GUV8 181 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 SERTM2A0A1B0GWG4 89 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 CRISP2P16562 243 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms