RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	CRYBG3	Q68DQ2	2970 aa		10.18	□□□□□ -0.78
CHRNA7-223	ENST00000637033	SPTBN4	Q9H254	2564 aa		10.18	□□□□□ -0.78
CHRNA7-223	ENST00000637033	NBR2	O15453	112 aa		10.18	□□□□□ -0.78
CHRNA7-223	ENST00000637033	NDUFS7	O75251	213 aa		10.18	□□□□□ -0.78
CHRNA7-223	ENST00000637033	UFC1	Q9Y3C8	167 aa		10.18	□□□□□ -0.78
CHRNA7-223	ENST00000637033	CSMD2	Q7Z408	3487 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	HBD	P02042	147 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	TMEM160	Q9NX00	188 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	TMEM14C	Q9P0S9	112 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	IGKV3-7	A0A075B6H7	116 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	CD3E	P07766	207 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	DEFB1	P60022	68 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	ZNF672	Q499Z4	452 aa	Predicted RBP	10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	IGFL3	Q6UXB1	125 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	FANCD2OS	Q96PS1	177 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	PRR25	Q96S07	402 aa		10.17	□□□□□ -0.78
CHRNA7-223	ENST00000637033	APOBEC3A	P31941	199 aa	Predicted RBP	10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033		Q8NA96	180 aa		10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033	FOXC2	Q99958	501 aa		10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033	C21orf62	Q9NYP8	219 aa		10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033	SMAD7	O15105	426 aa	Known RBP	10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033	CDSN	Q15517	529 aa		10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033	SFTA2	Q6UW10	78 aa		10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033	IL17REL	Q6ZVW7	336 aa		10.16	□□□□□ -0.78
CHRNA7-223	ENST00000637033	MRPS12	O15235	138 aa	Known RBP	10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	FXYD2	P54710	66 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	C3orf36	Q3SXR2	165 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	KAAG1	Q9UBP8	84 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	SPCS1	Q9Y6A9	102 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	TRGV3	P03979	118 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	MFAP4	P55083	255 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	OR2K2	Q8NGT1	345 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	DPM3	Q9P2X0	92 aa		10.15	□□□□□ -0.78
CHRNA7-223	ENST00000637033	SORL1	Q92673	2214 aa		10.15	□□□□□ -0.79
CHRNA7-223	ENST00000637033		K7ERU9	68 aa		10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	HOXB4	P17483	251 aa	Predicted RBP	10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	SMAD5-AS1	Q9Y6J3	95 aa		10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	AGRN	O00468	2067 aa		10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033		F8W735	103 aa	Predicted RBP	10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	C16orf54	Q6UWD8	224 aa		10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	NHP2	Q9NX24	153 aa	Known RBP	10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	DOPEY2	Q9Y3R5	2298 aa		10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	IGHV3OR16-10	A0A075B7F0	116 aa		10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033	ARPC1A	Q92747	370 aa		10.14	□□□□□ -0.79
CHRNA7-223	ENST00000637033		A6NDN8	102 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	C9orf118	A6NHY6	69 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	EFNA4	P52798	201 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	TMEM158	Q8WZ71	300 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	TRAV40	A0A0B4J280	105 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	LINC01548	A6NM66	108 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CLEC3B	P05452	202 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	C5orf64	Q2M2E5	130 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	PVRIG	Q6DKI7	326 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033	BOD1L2	Q8IYS8	172 aa		10.13	□□□□□ -0.79
CHRNA7-223	ENST00000637033		G3V318	75 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	NDUFA3	O95167	84 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	C8orf31	Q8N9H6	132 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CSPG4	Q6UVK1	2322 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	ZC2HC1B	Q5TFG8	222 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	AMTN	Q6UX39	209 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	OR1N2	Q8NGR9	330 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CFHR4	Q92496	578 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	TNFRSF6B	O95407	300 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	IGHG4	P01861	327 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CTSG	P08311	255 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	GTF2H5	Q6ZYL4	71 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	SMIM15	Q7Z3B0	74 aa		10.12	□□□□□ -0.79
CHRNA7-223	ENST00000637033	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033		B9A039	149 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	SEC11A	P67812	179 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CLEC19A	Q6UXS0	136 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	ADAMTSL5	Q6ZMM2	481 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CSTL1	Q9H114	145 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CCL21	O00585	134 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	IGF1	P05019	195 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	C15orf32	Q32M92	178 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	LGALS9B	Q3B8N2	356 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	LGALS9C	Q6DKI2	356 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	MAP1LC3A	Q9H492	121 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	TMEM8B	A6NDV4	472 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	LY6L	H3BQJ8	138 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	ZNF575	Q86XF7	245 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	WFDC12	Q8WWY7	111 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	RNF185	Q96GF1	192 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	C11orf21	Q9P2W6	132 aa		10.11	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CELSR2	Q9HCU4	2923 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	PPBP	P02775	128 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	RPL7	P18124	248 aa	Known RBP	10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	ZNF493	Q6ZR52	646 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	DTX2	Q86UW9	622 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	NOTCH3	Q9UM47	2321 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	CENPE	Q02224	2701 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	IGLV11-55	A0A075B6I3	123 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	HSD52	Q0P140	79 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033	SAMD5	Q5TGI4	173 aa		10.1	□□□□□ -0.79
CHRNA7-223	ENST00000637033		H3BRM9	83 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033	TNFRSF14	Q92956	283 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033	FOXC1	Q12948	553 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033	MAPKAPK5-AS1	Q8N8E1	139 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033	MRPL35	Q9NZE8	188 aa	Known RBP	10.09	□□□□□ -0.79

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