RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 PTTG1IPP53801 180 aa12.42□□□□□ -0.42
CHRNA7-221ENST00000636898 LINC01559Q495D7 138 aa12.42□□□□□ -0.42
CHRNA7-221ENST00000636898 CSMD1Q96PZ7 3565 aa12.42□□□□□ -0.42
CHRNA7-221ENST00000636898 IGHV3-35A0A0C4DH35 117 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 CLPSL1A2RUU4 121 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 CCL25O15444 150 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 NCR2O95944 276 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 ORM1P02763 201 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 CCDC140Q96MF4 163 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 TRBV7-1A0A0A6YYK4 115 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 CENPVL3A0A0U1RRI6 287 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 LMO4P61968 165 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 EEF1AKMT3Q96AZ1 226 aa12.41□□□□□ -0.42
CHRNA7-221ENST00000636898 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 MUC21A0A140T8X8 626 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 Q6ZVH6 145 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 DEFB125Q8N687 156 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 OR8A1Q8NGG7 326 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 OR1N2Q8NGR9 330 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 MRPL53Q96EL3 112 aaKnown RBP12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 ATP6V0BQ99437 205 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 UBTD1Q9HAC8 227 aa12.4□□□□□ -0.42
CHRNA7-221ENST00000636898 LINC01546A6NGU7 62 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 PRAC2D3DTV9 90 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 NPYP01303 97 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 ATRXP46100 2492 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 NPFFO15130 113 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 ERCC8Q13216 396 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 CLEC19AQ6UXS0 136 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
CHRNA7-221ENST00000636898 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
CHRNA7-221ENST00000636898 METTL26Q96S19 204 aa12.38□□□□□ -0.43
CHRNA7-221ENST00000636898 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
CHRNA7-221ENST00000636898 G3V318 75 aa12.38□□□□□ -0.43
CHRNA7-221ENST00000636898 RNF182Q8N6D2 247 aa12.38□□□□□ -0.43
CHRNA7-221ENST00000636898 C5orf56Q8N8D9 126 aa12.38□□□□□ -0.43
CHRNA7-221ENST00000636898 MAP1LC3AQ9H492 121 aa12.38□□□□□ -0.43
CHRNA7-221ENST00000636898 SMKR1H3BMG3 65 aa12.37□□□□□ -0.43
CHRNA7-221ENST00000636898 TAX1BP3O14907 124 aa12.37□□□□□ -0.43
CHRNA7-221ENST00000636898 NHLH1Q02575 133 aa12.37□□□□□ -0.43
CHRNA7-221ENST00000636898 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
CHRNA7-221ENST00000636898 IL17RELQ6ZVW7 336 aa12.37□□□□□ -0.43
CHRNA7-221ENST00000636898 IFI27L1Q96BM0 104 aa12.37□□□□□ -0.43
CHRNA7-221ENST00000636898 U3KQE9 123 aa12.37□□□□□ -0.43
CHRNA7-221ENST00000636898 SPTBN1Q01082 2364 aaKnown RBP12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 PRSS57Q6UWY2 283 aa12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 MSRB1Q9NZV6 116 aa12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 LINC01548A6NM66 108 aa12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 CD5LO43866 347 aa12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 FGF6P10767 208 aa12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 CACNG7P62955 275 aa12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 AGPAT4-IT1Q9H0P7 198 aa12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
CHRNA7-221ENST00000636898 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
CHRNA7-221ENST00000636898 TRAV8-2A0A0B4J237 113 aa12.35□□□□□ -0.43
CHRNA7-221ENST00000636898 TMEM78Q5T7P6 136 aa12.35□□□□□ -0.43
CHRNA7-221ENST00000636898 MED13LQ71F56 2210 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 CRIP2P52943 208 aaPredicted RBP12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 ATP5G2Q06055 141 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 ANKRD39Q53RE8 183 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 C9orf47Q6ZRZ4 202 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 C8orf86Q6ZUL3 223 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 IGKV3D-20A0A0C4DH25 116 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 IGHV3-66A0A0C4DH42 116 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 C19orf54Q5BKX5 351 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 BOD1L2Q8IYS8 172 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 MOB4Q9Y3A3 225 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 COL6A6A6NMZ7 2263 aa12.34□□□□□ -0.43
CHRNA7-221ENST00000636898 TNFRSF6BO95407 300 aa12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 SFTPCP11686 197 aa12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 SEC11AP67812 179 aa12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 VAMP3Q15836 100 aa12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 PSMG4Q5JS54 123 aa12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 ASH1LQ9NR48 2969 aaKnown RBP12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 FCER1GP30273 86 aa12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 ITLN2Q8WWU7 325 aaPredicted RBP12.33□□□□□ -0.44
CHRNA7-221ENST00000636898 TRAV41A0A0B4J266 112 aa12.32□□□□□ -0.44
CHRNA7-221ENST00000636898 K7EP13 123 aa12.32□□□□□ -0.44
CHRNA7-221ENST00000636898 SIVA1O15304 175 aa12.32□□□□□ -0.44
CHRNA7-221ENST00000636898 FXYD7P58549 80 aa12.32□□□□□ -0.44
CHRNA7-221ENST00000636898 OR9G4Q8NGQ1 327 aa12.32□□□□□ -0.44
CHRNA7-221ENST00000636898 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
CHRNA7-221ENST00000636898 CBY1Q9Y3M2 126 aa12.32□□□□□ -0.44
CHRNA7-221ENST00000636898 TMEM97Q5BJF2 176 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 OR4C5Q8NGB2 326 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 C11orf21Q9P2W6 132 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 SVEP1Q4LDE5 3571 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV4-4A0A075B6R2 117 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV3OR16-13A0A075B7E8 117 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV3-74A0A0B4J1X5 117 aa12.31□□□□□ -0.44
CHRNA7-221ENST00000636898 SMAD7O15105 426 aaKnown RBP12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 LEPP41159 167 aa12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 C9orf139Q6ZV77 190 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms