RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	OVOL1	O14753	267 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	PAX1	P15863	534 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	ARL17A	Q8IVW1	177 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	PSMG3-AS1	Q96PY0	264 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TMEM70	Q9BUB7	260 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	XCL2	Q9UBD3	114 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TRAV1-1	A0A0B4J248	108 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	SMAGP	Q0VAQ4	97 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	OR11H1	Q8NG94	326 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	C20orf144	Q9BQM9	153 aa		11.37	□□□□□ -0.59
NEDD4L-238	ENST00000635997	LHB	P01229	141 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TDRG1	Q3Y452	100 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	LYZL1	Q6UWQ5	148 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	LINC00311	Q8N616	119 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	COX11	Q9Y6N1	276 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TANC2	Q9HCD6	1990 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	OR10J3	Q5JRS4	329 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TRGV1	A0A0A0MS02	117 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	KNCN	A6PVL3	124 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TOMM40	O96008	361 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	DEFB136	Q30KP8	78 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	PET117	Q6UWS5	81 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	C9orf139	Q6ZV77	190 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TSKU	Q8WUA8	353 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	HIST1H4G	Q99525	98 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	CLPSL1	A2RUU4	121 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	OR11H12	B2RN74	326 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997		Q6AWC8	147 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	RITA1	Q96K30	269 aa		11.36	□□□□□ -0.59
NEDD4L-238	ENST00000635997	CCL25	O15444	150 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	MPV17L2	Q567V2	206 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	OCIAD2	Q56VL3	154 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	LYPD6	Q86Y78	171 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	OR11H2	Q8NH07	326 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	CST9L	Q9H4G1	147 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997		A0A0U1RRA0	63 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	PPP1R17	O96001	155 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	DEFB130B	P0DP73	79 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	DEFB130A	P0DP74	79 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	FABP2	P12104	132 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	LGALS3	P17931	250 aa	Known RBP	11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	SPINK13	Q1W4C9	94 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	C14orf178	Q8N769	122 aa	Predicted RBP	11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	SHANK2-AS3	Q9BTD1	123 aa		11.35	□□□□□ -0.59
NEDD4L-238	ENST00000635997	C10orf142	B7Z368	130 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	LEP	P41159	167 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	CDSN	Q15517	529 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	NDUFA3	O95167	84 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	SRSF2	Q01130	221 aa	Known RBP	11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997		Q6ZWC4	215 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	LYPD6B	Q8NI32	183 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	NCOR1P1	Q9H4R4	102 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997		H3BUT2	72 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	SHISA2	Q6UWI4	295 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	IGHV4-31	P0DP07	118 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	SSBP2	P81877	361 aa	Predicted RBP	11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	TCTEX1D4	Q5JR98	221 aa		11.34	□□□□□ -0.59
NEDD4L-238	ENST00000635997	BAHCC1	Q9P281	2608 aa		11.33	□□□□□ -0.6
NEDD4L-238	ENST00000635997		A0A087WWL8	130 aa		11.33	□□□□□ -0.6
NEDD4L-238	ENST00000635997	FAM223B	A6NKX1	122 aa		11.33	□□□□□ -0.6
NEDD4L-238	ENST00000635997	FAM223A	Q8IWN6	122 aa		11.33	□□□□□ -0.6
NEDD4L-238	ENST00000635997	TRAV9-2	A0A087WT02	112 aa		11.33	□□□□□ -0.6
NEDD4L-238	ENST00000635997	SMKR1	H3BMG3	65 aa		11.33	□□□□□ -0.6
NEDD4L-238	ENST00000635997	SH2D1A	O60880	128 aa		11.33	□□□□□ -0.6
NEDD4L-238	ENST00000635997	GAGE12B	A1L429	117 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	RNASE1	P07998	156 aa	Known RBP	11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	C3orf79	P0CE67	100 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	RCHY1	Q96PM5	261 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	CMC4	P56277	68 aa	Predicted RBP	11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	ZNF415	Q09FC8	603 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	PSG3	Q16557	428 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	CHCHD5	Q9BSY4	110 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	ST20	Q9HBF5	79 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	HOXB4	P17483	251 aa	Predicted RBP	11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	PAPPA-AS1	Q5QFB9	102 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	CENPVL3	A0A0U1RRI6	287 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	ZNF726P1	Q15940	193 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	LINC00477	Q96M19	166 aa		11.32	□□□□□ -0.6
NEDD4L-238	ENST00000635997	TRAV12-2	A0A075B6T6	113 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	CDKN1B	P46527	198 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	IL15RA	Q13261	267 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	MRPL52	Q86TS9	123 aa	Known RBP	11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997		D6R8Y8	96 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	IGLC1	P0CG04	106 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	ZNF876P	Q49A33	203 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	MRAP2	Q96G30	205 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	GTSF1L	Q9H1H1	148 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	TMEM101	Q96IK0	257 aa		11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	SOX21	Q9Y651	276 aa	Predicted RBP	11.31	□□□□□ -0.6
NEDD4L-238	ENST00000635997	HLA-DMB	P28068	263 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	NUP35	Q8NFH5	326 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	OR13C6P	Q8NH95	151 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	KRTAP27-1	Q3LI81	207 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	C17orf77	Q96MU5	243 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	IGHV3-64	A0A075B6Q5	118 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	IGLC7	A0M8Q6	106 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	GGTLC3	B5MD39	225 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	ARMS2	P0C7Q2	107 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 77 ms