RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 SLC51BQ86UW2 128 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 C9orf62Q8N4C0 152 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 IL17DQ8TAD2 202 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 LINC00477Q96M19 166 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 NEU1Q99519 415 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
CLN6-211ENST00000635754 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
CLN6-211ENST00000635754 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
CLN6-211ENST00000635754 FHITP49789 147 aa11.2□□□□□ -0.62
CLN6-211ENST00000635754 FGF8P55075 233 aaPredicted RBP11.2□□□□□ -0.62
CLN6-211ENST00000635754 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
CLN6-211ENST00000635754 FAM213BQ8TBF2 198 aa11.2□□□□□ -0.62
CLN6-211ENST00000635754 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
CLN6-211ENST00000635754 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
CLN6-211ENST00000635754 DIRC3C9JPN6 131 aa11.19□□□□□ -0.62
CLN6-211ENST00000635754 DEFB4AO15263 64 aa11.19□□□□□ -0.62
CLN6-211ENST00000635754 TMEM256Q8N2U0 113 aa11.19□□□□□ -0.62
CLN6-211ENST00000635754 VGLL1Q99990 258 aa11.19□□□□□ -0.62
CLN6-211ENST00000635754 A0A1W2PRE2 83 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 C3orf84H3BNL1 204 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 J3KRW8 73 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 HBE1P02100 147 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 C5orf17Q8NAS9 161 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 C20orf144Q9BQM9 153 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 TMPRSS5Q9H3S3 457 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 RBMY1A1P0DJD3 496 aaKnown RBP11.18□□□□□ -0.62
CLN6-211ENST00000635754 RBMY1CP0DJD4 496 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 ZNF138P52744 262 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 RBMY1FQ15415 496 aaKnown RBP11.18□□□□□ -0.62
CLN6-211ENST00000635754 RRN3P1Q2M238 152 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 SFT2D1Q8WV19 159 aa11.18□□□□□ -0.62
CLN6-211ENST00000635754 TMEM189A5PLL7 270 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 GGTLC3B5MD39 225 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 RAB5CP51148 216 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 SUMO1P63165 101 aaKnown RBP11.17□□□□□ -0.62
CLN6-211ENST00000635754 GNG5P63218 68 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 Q8TAT8 98 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 MBD3L1Q8WWY6 194 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 FAM19A4Q96LR4 140 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 LINC01587Q99440 93 aa11.17□□□□□ -0.62
CLN6-211ENST00000635754 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 C7orf71A4D174 169 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 K7EQM0 130 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 GPX1P07203 203 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 NMBP08949 121 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 CRISP2P16562 243 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 UBE2G2P60604 165 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 NIPSNAP3BQ9BS92 247 aa11.16□□□□□ -0.62
CLN6-211ENST00000635754 NKX6-2Q9C056 277 aaPredicted RBP11.16□□□□□ -0.62
CLN6-211ENST00000635754 YTHDF2Q9Y5A9 579 aaKnown RBP11.16□□□□□ -0.62
CLN6-211ENST00000635754 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
CLN6-211ENST00000635754 KLLNB2CW77 178 aa11.15□□□□□ -0.62
CLN6-211ENST00000635754 H7BYZ3 331 aa11.15□□□□□ -0.62
CLN6-211ENST00000635754 J3QL48 77 aa11.15□□□□□ -0.62
CLN6-211ENST00000635754 NKX2-5P52952 324 aaPredicted RBP11.15□□□□□ -0.62
CLN6-211ENST00000635754 ZFAND6Q6FIF0 208 aa11.15□□□□□ -0.62
CLN6-211ENST00000635754 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
CLN6-211ENST00000635754 A0A1B0GV50 99 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 FAM74A7A6NL05 159 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 ZNF705GA8MUZ8 300 aaPredicted RBP11.14□□□□□ -0.63
CLN6-211ENST00000635754 TCRAP04437 139 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 SULT1A2P50226 295 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 EMP1P54849 157 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 TAS2R60P59551 318 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 ZFAND2AQ8N6M9 145 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 EPDR1Q9UM22 224 aa11.14□□□□□ -0.63
CLN6-211ENST00000635754 CXorf65A6NEN9 183 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 IFNA7P01567 189 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 HTN1P15515 57 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
CLN6-211ENST00000635754 SMCPP49901 116 aaPredicted RBP11.13□□□□□ -0.63
CLN6-211ENST00000635754 BTN1A1Q13410 526 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 CASC10Q5T4H9 136 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 CYB561D1Q8N8Q1 229 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 ATG101Q9BSB4 218 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 ARL2-SNX15V9GYD0 113 aa11.13□□□□□ -0.63
CLN6-211ENST00000635754 TRAV8-1A0A0A6YYK1 113 aa11.12□□□□□ -0.63
CLN6-211ENST00000635754 TEX46H3BTG2 121 aa11.12□□□□□ -0.63
CLN6-211ENST00000635754 PPT1P50897 306 aa11.12□□□□□ -0.63
CLN6-211ENST00000635754 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
CLN6-211ENST00000635754 CST9LP1Q5W188 147 aa11.12□□□□□ -0.63
CLN6-211ENST00000635754 PYGO2Q9BRQ0 406 aa11.12□□□□□ -0.63
CLN6-211ENST00000635754 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
CLN6-211ENST00000635754 FBLL1A6NHQ2 334 aaKnown RBP11.11□□□□□ -0.63
CLN6-211ENST00000635754 PRM2P04554 102 aa11.11□□□□□ -0.63
CLN6-211ENST00000635754 PRR9Q5T870 116 aa11.11□□□□□ -0.63
CLN6-211ENST00000635754 CCDC28AQ8IWP9 274 aa11.11□□□□□ -0.63
CLN6-211ENST00000635754 C16orf74Q96GX8 76 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms