RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 NRARPQ7Z6K4 114 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
LINC00339-206ENST00000634451 ZFAND2AQ8N6M9 145 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 ST6GAL2Q96JF0 529 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 VGLL1Q99990 258 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 LINC00467Q9BRT7 94 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 EREGO14944 169 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 CAMLGP49069 296 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 PXDC1Q5TGL8 231 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 ZNF680Q8NEM1 530 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 Q8TAT8 98 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 SRRQ9GZT4 340 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 DNAJC4Q9NNZ3 241 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 PTTG2Q9NZH5 202 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 FAM30AQ9NZY2 134 aa8.68□□□□□ -1.02
LINC00339-206ENST00000634451 TRBV19A0A075B6N1 114 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 FAM24AA6NFZ4 105 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 E5RGE8 158 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 IFNA5P01569 189 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 GCSHP23434 173 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 ANXA2RQ3ZCQ2 193 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 BLNKQ8WV28 456 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 BCL7BQ9BQE9 202 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 C11orf1Q9H5F2 150 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
LINC00339-206ENST00000634451 LOC100131303A0A0U1RQF7 123 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 K7EQD1 137 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 MPDU1O75352 247 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 TAS2R30P59541 319 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 MUC21Q5SSG8 566 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 S100A7AQ86SG5 101 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 ZNF479Q96JC4 524 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 SDHCQ99643 169 aaPredicted RBP8.66□□□□□ -1.02
LINC00339-206ENST00000634451 PRO0255Q9UI72 69 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 WDR83OSQ9Y284 106 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 LSM5Q9Y4Y9 91 aaKnown RBP8.66□□□□□ -1.02
LINC00339-206ENST00000634451 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
LINC00339-206ENST00000634451 RGS13O14921 159 aa8.65□□□□□ -1.02
LINC00339-206ENST00000634451 CRISP2P16562 243 aa8.65□□□□□ -1.02
LINC00339-206ENST00000634451 FAM122CQ6P4D5 195 aa8.65□□□□□ -1.02
LINC00339-206ENST00000634451 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.02
LINC00339-206ENST00000634451 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 IGSF23A1L1A6 192 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 GPX1P07203 203 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 BCAP31P51572 246 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 CAV2P51636 162 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 ZNF415Q09FC8 603 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 MRPL23Q16540 153 aaKnown RBP8.64□□□□□ -1.03
LINC00339-206ENST00000634451 GUK1Q16774 197 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 IBA57Q5T440 356 aaKnown RBP8.64□□□□□ -1.03
LINC00339-206ENST00000634451 Q6ZSN1 163 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
LINC00339-206ENST00000634451 GGACTQ9BVM4 153 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 SLC25A2Q9BXI2 301 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 RNF24Q9Y225 148 aa8.64□□□□□ -1.03
LINC00339-206ENST00000634451 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
LINC00339-206ENST00000634451 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 NOL3O60936 208 aaKnown RBP8.63□□□□□ -1.03
LINC00339-206ENST00000634451 ZNF253O75346 499 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 GYPEP15421 78 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 BAXQ07812 192 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 WFDC2Q14508 124 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 Q6ZRG5 221 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 C9orf47Q6ZRZ4 202 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 MIR17HGQ75NE6 70 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 MITD1Q8WV92 249 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 UQCC1Q9NVA1 299 aa8.63□□□□□ -1.03
LINC00339-206ENST00000634451 HMCN2Q8NDA2 5059 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 TRGV4A0A0C4DH28 118 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 FAM25EA8MYX2 175 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 J3QL48 77 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 L7N2F9 121 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 CRYGDP07320 174 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 HIST1H1EP10412 219 aaKnown RBP8.62□□□□□ -1.03
LINC00339-206ENST00000634451 SRIP30626 198 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 VAMP2P63027 116 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 VWC2Q2TAL6 325 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 OR1L4Q8NGR5 311 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 DEDD2Q8WXF8 326 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 FAM167A-AS1Q96KT0 104 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 LINC00477Q96M19 166 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 ARPC5LQ9BPX5 153 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 SEC22CQ9BRL7 303 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 MRPL32Q9BYC8 188 aaKnown RBP8.62□□□□□ -1.03
LINC00339-206ENST00000634451 TMEM14CQ9P0S9 112 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 ZNF492Q9P255 531 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
LINC00339-206ENST00000634451 FGF7P21781 194 aa8.61□□□□□ -1.03
LINC00339-206ENST00000634451 RPL29P47914 159 aaKnown RBP8.61□□□□□ -1.03
LINC00339-206ENST00000634451 PHYHIPLQ96FC7 376 aa8.61□□□□□ -1.03
LINC00339-206ENST00000634451 IGHV3-16A0A0C4DH30 117 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 EIF3GO75821 320 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00339-206ENST00000634451 OR10J4P0C629 311 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms