RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 UBE2E2Q96LR5 201 aa10.87□□□□□ -0.67
LIMS4-204ENST00000632897 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
LIMS4-204ENST00000632897 MRPL18Q9H0U6 180 aaKnown RBP10.87□□□□□ -0.67
LIMS4-204ENST00000632897 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
LIMS4-204ENST00000632897 XKRY2A2RUG3 117 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 HIGD1CA8MV81 97 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 IGFL4Q6B9Z1 124 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 C10orf99Q6UWK7 81 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 TMEM136Q6ZRR5 245 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 OR2D3Q8NGH3 330 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 TMEM158Q8WZ71 300 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 PRR25Q96S07 402 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 VGLL1Q99990 258 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 SMPXQ9UHP9 88 aa10.86□□□□□ -0.67
LIMS4-204ENST00000632897 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
LIMS4-204ENST00000632897 SONP18583 2426 aaKnown RBP10.85□□□□□ -0.67
LIMS4-204ENST00000632897 ZNF705FA8MVS1 300 aaPredicted RBP10.85□□□□□ -0.67
LIMS4-204ENST00000632897 FAM162BQ5T6X4 162 aa10.85□□□□□ -0.67
LIMS4-204ENST00000632897 SAMD13Q5VXD3 122 aa10.85□□□□□ -0.67
LIMS4-204ENST00000632897 MRPL54Q6P161 138 aaKnown RBP10.85□□□□□ -0.67
LIMS4-204ENST00000632897 RBPMS2Q6ZRY4 209 aaKnown RBP10.85□□□□□ -0.67
LIMS4-204ENST00000632897 REC114Q7Z4M0 266 aa10.85□□□□□ -0.67
LIMS4-204ENST00000632897 HIST3H2BBQ8N257 126 aa10.85□□□□□ -0.67
LIMS4-204ENST00000632897 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
LIMS4-204ENST00000632897 MDFIQ99750 246 aa10.85□□□□□ -0.67
LIMS4-204ENST00000632897 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
LIMS4-204ENST00000632897 SPINK4O60575 86 aa10.84□□□□□ -0.67
LIMS4-204ENST00000632897 CRIP1P50238 77 aa10.84□□□□□ -0.67
LIMS4-204ENST00000632897 LINC00518Q8N0U6 118 aa10.84□□□□□ -0.67
LIMS4-204ENST00000632897 RNF182Q8N6D2 247 aa10.84□□□□□ -0.67
LIMS4-204ENST00000632897 C8orf49Q96NF6 230 aa10.84□□□□□ -0.67
LIMS4-204ENST00000632897 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
LIMS4-204ENST00000632897 SOCS3O14543 225 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 FOXA3P55318 350 aaPredicted RBP10.83□□□□□ -0.68
LIMS4-204ENST00000632897 SRSF2Q01130 221 aaKnown RBP10.83□□□□□ -0.68
LIMS4-204ENST00000632897 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 Q6AWC8 147 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 TCF24Q7RTU0 167 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 GTSF1Q8WW33 167 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 DUX5Q96PT3 197 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 NRN1Q9NPD7 142 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 PPP1R14DQ9NXH3 145 aa10.83□□□□□ -0.68
LIMS4-204ENST00000632897 A0A1B0GXF2 115 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 A8MWP6 167 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 PRAC2D3DTV9 90 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 LGALS9O00182 355 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 SH2D1AO60880 128 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 FRMD6-AS1P0C7T7 363 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 S100A2P29034 98 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 RPS20P60866 119 aaKnown RBP10.82□□□□□ -0.68
LIMS4-204ENST00000632897 RAB4BP61018 213 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 C9orf47Q6ZRZ4 202 aa10.82□□□□□ -0.68
LIMS4-204ENST00000632897 IFITM10A6NMD0 228 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 SMIM6P0DI80 62 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 HBBP68871 147 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 TMEM78Q5T7P6 136 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 Q8TAT8 98 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 ASCL2Q99929 193 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 OVOL1O14753 267 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 APCSP02743 223 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 ZNF138P52744 262 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 ERCC8Q13216 396 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 KLHDC1Q8N7A1 406 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 GPR61Q9BZJ8 451 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 LENEPQ9Y5L5 61 aa10.81□□□□□ -0.68
LIMS4-204ENST00000632897 IGHV4OR15-8A0A075B7B6 117 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 A0A087WW49 117 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 A0A1B0GW15 77 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 TMEM213A2RRL7 107 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 TMEM189A5PLL7 270 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 FAM181BA6NEQ2 426 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 HAX1O00165 279 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 PRB4P10163 310 aaPredicted RBP10.8□□□□□ -0.68
LIMS4-204ENST00000632897 CRISP2P16562 243 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 Q6ZSV7 163 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 ZNF738Q8NE65 137 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 C20orf173Q96LM9 149 aa10.8□□□□□ -0.68
LIMS4-204ENST00000632897 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
LIMS4-204ENST00000632897 Q0VG73 95 aa10.79□□□□□ -0.68
LIMS4-204ENST00000632897 WFDC12Q8WWY7 111 aa10.79□□□□□ -0.68
LIMS4-204ENST00000632897 ATRQ13535 2644 aa10.79□□□□□ -0.68
LIMS4-204ENST00000632897 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 GZMBP10144 247 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 SRD5A1P18405 259 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 HOXD3P31249 432 aaPredicted RBP10.78□□□□□ -0.68
LIMS4-204ENST00000632897 ID1P41134 155 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 HIST1H1AQ02539 215 aaPredicted RBP10.78□□□□□ -0.68
LIMS4-204ENST00000632897 RIGQ13278 110 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 PDZD11Q5EBL8 140 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 GDF5OSQ5U4N7 250 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 OR10J6PQ8NGY7 276 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 C4orf3Q8WVX3 66 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 LINC00477Q96M19 166 aa10.78□□□□□ -0.68
LIMS4-204ENST00000632897 COL6A5A8TX70 2615 aa10.77□□□□□ -0.68
LIMS4-204ENST00000632897 A0A1B0GUT8 65 aa10.77□□□□□ -0.69
LIMS4-204ENST00000632897 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms