RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 PYGO2Q9BRQ0 406 aa11.27□□□□□ -0.61
CHRNA4-211ENST00000628606 A0A1W2PPV4 95 aa11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 C7orf71A4D174 169 aa11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 GPX1P07203 203 aa11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 LYPD1Q8N2G4 141 aa11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
CHRNA4-211ENST00000628606 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
CHRNA4-211ENST00000628606 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
CHRNA4-211ENST00000628606 ZNF266Q14584 549 aa11.25□□□□□ -0.61
CHRNA4-211ENST00000628606 EPPK1P58107 5090 aaKnown RBP11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 VPS13DQ5THJ4 4388 aa11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 IGKV2-40A0A087WW87 121 aaPredicted RBP11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 IGKV2D-40P01614 121 aaPredicted RBP11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 NMBP08949 121 aa11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 M6PRP20645 277 aa11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 RNF212Q495C1 297 aa11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 PHYHIPLQ96FC7 376 aa11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
CHRNA4-211ENST00000628606 KLLNB2CW77 178 aa11.23□□□□□ -0.61
CHRNA4-211ENST00000628606 FAM74A1Q5RGS3 127 aa11.23□□□□□ -0.61
CHRNA4-211ENST00000628606 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
CHRNA4-211ENST00000628606 ASB13Q8WXK3 278 aa11.23□□□□□ -0.61
CHRNA4-211ENST00000628606 VGLL1Q99990 258 aa11.23□□□□□ -0.61
CHRNA4-211ENST00000628606 Q9H3A6 140 aa11.23□□□□□ -0.61
CHRNA4-211ENST00000628606 RGS13O14921 159 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 NUDT3O95989 172 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 CRISP2P16562 243 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 ZNF138P52744 262 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 BTN1A1Q13410 526 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 PQLC2Q6ZP29 291 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 EIF4E3Q8N5X7 224 aaKnown RBP11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 INO80EQ8NBZ0 244 aaPredicted RBP11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 RXFP4Q8TDU9 374 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 FAM19A4Q96LR4 140 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
CHRNA4-211ENST00000628606 GAGE12BA1L429 117 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 M0R2N4 97 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 GAGE7O76087 117 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 GIPP09681 153 aaPredicted RBP11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 GAGE12FP0CL80 117 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 GAGE12GP0CL81 117 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 GAGE12IP0CL82 117 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 CD300CQ08708 224 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 OR5I1Q13606 314 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 OR10G9Q8NGN4 311 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 OR10G7Q8NGN6 311 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 ZNF503Q96F45 646 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 HYLS1Q96M11 299 aa11.21□□□□□ -0.61
CHRNA4-211ENST00000628606 TRBV7-9A0A0J9YWB2 115 aa11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 ZNF324O75467 553 aaPredicted RBP11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 RAB2AP61019 212 aa11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 DAZ2Q13117 558 aaKnown RBP11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 HSD17B11Q8NBQ5 300 aa11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
CHRNA4-211ENST00000628606 PGPA6NDG6 321 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 MBP02144 154 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 FAM3BP58499 235 aaPredicted RBP11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 ANXA2RQ3ZCQ2 193 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 LINC00336Q6ZUF6 198 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 ZFAND2AQ8N6M9 145 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 ARPC5LQ9BPX5 153 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 OTORQ9NRC9 128 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 GSN-AS1Q9NRJ2 163 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 DNAH6Q9C0G6 4158 aa11.19□□□□□ -0.62
CHRNA4-211ENST00000628606 IGLV2-18A0A075B6J9 118 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 DIRC3C9JPN6 131 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 CDC34P49427 236 aaPredicted RBP11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 CCL18P55774 89 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 LGALS9BQ3B8N2 356 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 Q8TAT8 98 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 GNPNAT1Q96EK6 184 aaPredicted RBP11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 PSMG3Q9BT73 122 aaPredicted RBP11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 RPH3ALQ9UNE2 315 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 FRAS1Q86XX4 4008 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 BIRC6Q9NR09 4857 aa11.18□□□□□ -0.62
CHRNA4-211ENST00000628606 IGHV1OR15-1A0A075B7D0 117 aa11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 FXYD6-FXYD2A0A087WZ82 144 aa11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 TRGV1A0A0A0MS02 117 aa11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 EIF3GO75821 320 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 SERF2P84101 59 aa11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 OR2G3Q8NGZ4 309 aa11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 LENEPQ9Y5L5 61 aa11.17□□□□□ -0.62
CHRNA4-211ENST00000628606 TRAV26-1A0A087WT03 109 aa11.16□□□□□ -0.62
CHRNA4-211ENST00000628606 HMGB3O15347 200 aaKnown RBP11.16□□□□□ -0.62
CHRNA4-211ENST00000628606 ATP6V0CP27449 155 aa11.16□□□□□ -0.62
CHRNA4-211ENST00000628606 IBA57Q5T440 356 aaKnown RBP11.16□□□□□ -0.62
CHRNA4-211ENST00000628606 Q6ZTI0 123 aa11.16□□□□□ -0.62
CHRNA4-211ENST00000628606 OR2T35Q8NGX2 323 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms