RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SMIM3Q9BZL3 60 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 WDR61Q9GZS3 305 aaKnown RBP4.58□□□□□ -1.68
TCF4-249ENST00000625716 MED28Q9H204 178 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 TMEM14CQ9P0S9 112 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 MBD2Q9UBB5 411 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 PRELID1Q9Y255 219 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 HSPB11Q9Y547 144 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 YTHDF2Q9Y5A9 579 aaKnown RBP4.58□□□□□ -1.68
TCF4-249ENST00000625716 ALG5Q9Y673 324 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 TRBV19A0A075B6N1 114 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 H7BYZ3 331 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 PYYP10082 97 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 HTN3P15516 51 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 TAS2R45P59539 299 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 TAS2R60P59551 318 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 PDE6HQ13956 83 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 GCSAMLQ5JQS6 135 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 MIR17HGQ75NE6 70 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 RPP25LQ8N5L8 163 aaKnown RBP4.57□□□□□ -1.68
TCF4-249ENST00000625716 MRPL53Q96EL3 112 aaKnown RBP4.57□□□□□ -1.68
TCF4-249ENST00000625716 C20orf144Q9BQM9 153 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 PAXXQ9BUH6 204 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 OR51M1Q9H341 326 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 ZNF586Q9NXT0 402 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 DKK2Q9UBU2 259 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 FUT9Q9Y231 359 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 AGRNO00468 2067 aa4.57□□□□□ -1.68
TCF4-249ENST00000625716 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
TCF4-249ENST00000625716 TENM2Q9NT68 2774 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 A0A1W2PPV4 95 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 LYRM9A8MSI8 78 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 PRAC2D3DTV9 90 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 J3KRW8 73 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 CRXO43186 299 aaPredicted RBP4.56□□□□□ -1.68
TCF4-249ENST00000625716 OR7C2O60412 319 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 NBEAP1P0C6P0 100 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 P0DMU3 169 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 FAM231AP0DMU4 169 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 FAM231CP0DMU5 169 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 DEFB130BP0DP73 79 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 DEFB130AP0DP74 79 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 CSN1S1P47710 185 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 OXA1LQ15070 435 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 ACOT6Q3I5F7 207 aaPredicted RBP4.56□□□□□ -1.68
TCF4-249ENST00000625716 FFAR4Q5NUL3 377 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 TMEM78Q5T7P6 136 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 NTN5Q8WTR8 489 aaPredicted RBP4.56□□□□□ -1.68
TCF4-249ENST00000625716 C16orf74Q96GX8 76 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 FAM210BQ96KR6 192 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 LINC00477Q96M19 166 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 SLC25A2Q9BXI2 301 aa4.56□□□□□ -1.68
TCF4-249ENST00000625716 TRAV12-3A0A0B4J271 114 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 SNURFLB1AK76 121 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 M0R3E3 92 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 GPX1P07203 203 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 OR10J4P0C629 311 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 AZU1P20160 251 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 RANP62826 216 aaKnown RBP4.55□□□□□ -1.68
TCF4-249ENST00000625716 ZNF266Q14584 549 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 FCN2Q15485 313 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 KHDC3LQ587J8 217 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 FAM74A1Q5RGS3 127 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 FAM122CQ6P4D5 195 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 UBE2DNLQ8IWF7 75 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 EXOC3-AS1Q8N2X6 119 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 INO80EQ8NBZ0 244 aaPredicted RBP4.55□□□□□ -1.68
TCF4-249ENST00000625716 TMEM263Q8WUH6 116 aaKnown RBP4.55□□□□□ -1.68
TCF4-249ENST00000625716 ASB13Q8WXK3 278 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 ODF3Q96PU9 254 aa4.55□□□□□ -1.68
TCF4-249ENST00000625716 PARD6GQ9BYG4 376 aaPredicted RBP4.55□□□□□ -1.68
TCF4-249ENST00000625716 TIMM8BQ9Y5J9 83 aaPredicted RBP4.55□□□□□ -1.68
TCF4-249ENST00000625716 NDUFB4O95168 129 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 PRM2P04554 102 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 SLC25A5P05141 298 aaKnown RBP4.54□□□□□ -1.68
TCF4-249ENST00000625716 ATP5G1P05496 136 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 CT45A10P0DMU9 189 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 M6PRP20645 277 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 RNASE4P34096 147 aaKnown RBP4.54□□□□□ -1.68
TCF4-249ENST00000625716 ATP5G3P48201 142 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 UBE2L3P68036 154 aaKnown RBP4.54□□□□□ -1.68
TCF4-249ENST00000625716 ERCC8Q13216 396 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 GFI1BQ5VTD9 330 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 LYPD1Q8N2G4 141 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 CMTM2Q8TAZ6 248 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 RXFP4Q8TDU9 374 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 FXYD5Q96DB9 178 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 FAM167A-AS1Q96KT0 104 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 WFDC1Q9HC57 220 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 NOP10Q9NPE3 64 aaKnown RBP4.54□□□□□ -1.68
TCF4-249ENST00000625716 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
TCF4-249ENST00000625716 CSMD3Q7Z407 3707 aa4.54□□□□□ -1.68
TCF4-249ENST00000625716 IGKV2-40A0A087WW87 121 aaPredicted RBP4.53□□□□□ -1.68
TCF4-249ENST00000625716 BORCS7-ASMTA0A0B4J1R7 106 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 C7orf71A4D174 169 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 CBY3A6NI87 242 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 F5H768 121 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 IGKV2D-40P01614 121 aaPredicted RBP4.53□□□□□ -1.68
TCF4-249ENST00000625716 MBP02144 154 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms