RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 KRTAP10-4P60372 401 aaPredicted RBP9.39□□□□□ -0.91
SNX1-214ENST00000625244 BAP18Q8IXM2 172 aa9.39□□□□□ -0.91
SNX1-214ENST00000625244 SCGB1C1Q8TD33 95 aa9.39□□□□□ -0.91
SNX1-214ENST00000625244 TIMM8BQ9Y5J9 83 aaPredicted RBP9.39□□□□□ -0.91
SNX1-214ENST00000625244 A0A096LPF7 62 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 H3BNG1 76 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 COX7A2P2O60397 106 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 NXPH4O95158 308 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
SNX1-214ENST00000625244 B2MP61769 119 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 ZNF266Q14584 549 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 Q6ZNX1 250 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 OR10J6PQ8NGY7 276 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 AQP10Q96PS8 301 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 MGST2Q99735 147 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 HIGD1AQ9Y241 93 aa9.38□□□□□ -0.91
SNX1-214ENST00000625244 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 HTN1P15515 57 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 C1orf194Q5T5A4 169 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 OR8I2Q8N0Y5 310 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 GPR82Q96P67 336 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 LINC01587Q99440 93 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 PFDN5Q99471 154 aa9.37□□□□□ -0.91
SNX1-214ENST00000625244 ISLRO14498 428 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 RPL29P47914 159 aaKnown RBP9.36□□□□□ -0.91
SNX1-214ENST00000625244 PLP1P60201 277 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 OPCMLQ14982 345 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 CHAC2Q8WUX2 184 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 NPCDR1Q9BY65 106 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 WDR61Q9GZS3 305 aaKnown RBP9.36□□□□□ -0.91
SNX1-214ENST00000625244 SLC25A22Q9H936 323 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
SNX1-214ENST00000625244 BORCS7-ASMTA0A0B4J1R7 106 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 ARPC5O15511 151 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 GALR1P47211 349 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 CNN1P51911 297 aaKnown RBP9.35□□□□□ -0.91
SNX1-214ENST00000625244 Q5BKY6 102 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 MIC13Q5XKP0 118 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
SNX1-214ENST00000625244 NTN5Q8WTR8 489 aaPredicted RBP9.35□□□□□ -0.91
SNX1-214ENST00000625244 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 SLC25A39Q9BZJ4 359 aaPredicted RBP9.35□□□□□ -0.91
SNX1-214ENST00000625244 ARV1Q9H2C2 271 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 SLC39A9Q9NUM3 307 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 TNFSF18Q9UNG2 199 aa9.35□□□□□ -0.91
SNX1-214ENST00000625244 ZNF98A6NK75 572 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 H3BRN7 92 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 C1QBP02746 253 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 RPL7P18124 248 aaKnown RBP9.34□□□□□ -0.91
SNX1-214ENST00000625244 ASIPP42127 132 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 TAS2R60P59551 318 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 SAMD13Q5VXD3 122 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 Q6ZSA8 131 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 AKAP14Q86UN6 197 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
SNX1-214ENST00000625244 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
SNX1-214ENST00000625244 DNAJC4Q9NNZ3 241 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 MSRB1Q9NZV6 116 aa9.34□□□□□ -0.91
SNX1-214ENST00000625244 GAGE12BA1L429 117 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 LRCOL1A6NCL2 159 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 SMLR1H3BR10 107 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 GAGE7O76087 117 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 GAGE12FP0CL80 117 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 GAGE12GP0CL81 117 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 GAGE12IP0CL82 117 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 MEOX2P50222 304 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 LINC00305Q7Z4B0 112 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 SHANK2-AS3Q9BTD1 123 aa9.33□□□□□ -0.92
SNX1-214ENST00000625244 TAAR5O14804 337 aa9.32□□□□□ -0.92
SNX1-214ENST00000625244 C16orf92Q96LL3 132 aa9.32□□□□□ -0.92
SNX1-214ENST00000625244 RSG1Q9BU20 258 aa9.32□□□□□ -0.92
SNX1-214ENST00000625244 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
SNX1-214ENST00000625244 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
SNX1-214ENST00000625244 RNF222A6NCQ9 220 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 ZNF345Q14585 488 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 FFAR4Q5NUL3 377 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 ZNF493Q6ZR52 646 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 BPIFA4PQ86YQ2 179 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 TCTE3Q8IZS6 198 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 TMEM256Q8N2U0 113 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 TMEM263Q8WUH6 116 aaKnown RBP9.31□□□□□ -0.92
SNX1-214ENST00000625244 SLC25A32Q9H2D1 315 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 TIMM9Q9Y5J7 89 aa9.31□□□□□ -0.92
SNX1-214ENST00000625244 TRAV9-2A0A087WT02 112 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 A0A0D9SG52 128 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 KANTRA0A1W2PQU2 76 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 G3V3Q6 166 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 PFDN1O60925 122 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
SNX1-214ENST00000625244 ACOT6Q3I5F7 207 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms