RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 COL5A1P20908 1838 aaPredicted RBP7.28□□□□□ -1.24
USB1-216ENST00000624720 DIDO1Q9BTC0 2240 aaKnown RBP7.28□□□□□ -1.24
USB1-216ENST00000624720 PPYP01298 95 aa7.28□□□□□ -1.24
USB1-216ENST00000624720 HOXB4P17483 251 aaPredicted RBP7.28□□□□□ -1.24
USB1-216ENST00000624720 UNC119Q13432 240 aa7.28□□□□□ -1.24
USB1-216ENST00000624720 CEMP1Q6PRD7 247 aaPredicted RBP7.28□□□□□ -1.24
USB1-216ENST00000624720 SLC22A24Q8N4F4 322 aa7.28□□□□□ -1.24
USB1-216ENST00000624720 SPTBN1Q01082 2364 aaKnown RBP7.28□□□□□ -1.24
USB1-216ENST00000624720 H3BS24 57 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 CLDN14O95500 239 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 GCHFRP30047 84 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 FOXF2Q12947 444 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 EBI3Q14213 229 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 PQLC2Q6ZP29 291 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 OR5AS1Q8N127 324 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 C1orf159Q96HA4 380 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 CACNG5Q9UF02 275 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 NCR2O95944 276 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 NGFP01138 241 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 BORCS8Q96FH0 119 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 LYZL4Q96KX0 146 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 OTORQ9NRC9 128 aa7.27□□□□□ -1.25
USB1-216ENST00000624720 RPUSD1Q9UJJ7 312 aaKnown RBP7.27□□□□□ -1.25
USB1-216ENST00000624720 ACACBO00763 2458 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 LOC107984156A0A0G2JMH3 177 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 TIMM23O14925 209 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 ARL17AQ8IVW1 177 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 RFESDQ8TAC1 157 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 TIMM8BQ9Y5J9 83 aaPredicted RBP7.26□□□□□ -1.25
USB1-216ENST00000624720 LY96Q9Y6Y9 160 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 IZUMO1RA6ND01 250 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 EFNA4P52798 201 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 ZNF56Q15929 161 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 TMEM155Q4W5P6 130 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 Q8NA96 180 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 TXNDC17Q9BRA2 123 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 SRSF10O75494 262 aaKnown RBP7.26□□□□□ -1.25
USB1-216ENST00000624720 PYYP10082 97 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 HLA-DMBP28068 263 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 MYCNOSP40205 109 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 CXorf67Q86X51 503 aaPredicted RBP7.26□□□□□ -1.25
USB1-216ENST00000624720 C11orf45Q8TAV5 145 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 IL36RNQ9UBH0 155 aa7.26□□□□□ -1.25
USB1-216ENST00000624720 INTS1Q8N201 2190 aaKnown RBP7.25□□□□□ -1.25
USB1-216ENST00000624720 C15orf62A8K5M9 175 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 H3BP45 60 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 VSIG8P0DPA2 414 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 IGFBP3P17936 291 aaPredicted RBP7.25□□□□□ -1.25
USB1-216ENST00000624720 ZNF525Q8N782 197 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 C11orf44Q8N8P7 122 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 TMEM158Q8WZ71 300 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 ZNF747Q9BV97 191 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 NXT2Q9NPJ8 142 aaKnown RBP7.25□□□□□ -1.25
USB1-216ENST00000624720 Q9UF83 564 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 LSM4Q9Y4Z0 139 aaKnown RBP7.25□□□□□ -1.25
USB1-216ENST00000624720 CACNA1BQ00975 2339 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 IGKV1-9A0A0C4DH69 117 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 NPIPB11E5RHQ5 1161 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 LTAP01374 205 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 PSMB8P28062 276 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 MRPL55Q7Z7F7 128 aaKnown RBP7.25□□□□□ -1.25
USB1-216ENST00000624720 TAF15Q92804 592 aaKnown RBP eCLIP7.25□□□□□ -1.25
USB1-216ENST00000624720 PRDM14Q9GZV8 571 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 ABCA4P78363 2273 aa7.25□□□□□ -1.25
USB1-216ENST00000624720 SMIM27A0A1W2PRY6 76 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 MFAP2P55001 183 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 HERVK_113P61574 105 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 HBG1P69891 147 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 HBG2P69892 147 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 Q8N1Y9 231 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 TIMM9Q9Y5J7 89 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 TRBV25-1A0A075B6N4 114 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 TRAV17A0A0B4J275 112 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.24□□□□□ -1.25
USB1-216ENST00000624720 SCO2A0A1W2PP80 73 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 C9JCJ5 164 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 C9orf106Q8NAJ2 232 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 SPTSSAQ969W0 71 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 DPH3P1Q9H4G8 78 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 OSTCQ9NRP0 149 aa7.24□□□□□ -1.25
USB1-216ENST00000624720 HOXA3O43365 443 aaPredicted RBP7.23□□□□□ -1.25
USB1-216ENST00000624720 COX5AP20674 150 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 QRFPP83859 136 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 FXYD3Q14802 87 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 FAM27BQ5VT28 67 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 NEXN-AS1Q8NBZ9 246 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
USB1-216ENST00000624720 DLX1P56177 255 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 LGALS9BQ3B8N2 356 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 PSMG4Q5JS54 123 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 LGALS9CQ6DKI2 356 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 Q6P435 159 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 ZFP2Q6ZN57 461 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 CACNA1AO00555 2505 aa7.23□□□□□ -1.25
USB1-216ENST00000624720 TRAV26-2A0A0B4J265 109 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 C10orf128Q5T292 105 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 HDHD3Q9BSH5 251 aaPredicted RBP7.22□□□□□ -1.25
USB1-216ENST00000624720 TRAV12-2A0A075B6T6 113 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms