RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 VPS13CQ709C8 3753 aa0.75□□□□□ -2.29
CDKL5-207ENST00000624700 LAMA1P25391 3075 aa0.75□□□□□ -2.29
CDKL5-207ENST00000624700 CUX1P39880 1505 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 MGAQ8IWI9 3026 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 VIRMAQ69YN4 1812 aaKnown RBP0.74□□□□□ -2.29
CDKL5-207ENST00000624700 HLA-EP13747 358 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 EFNA4P52798 201 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 TAF1AQ15573 450 aaPredicted RBP0.74□□□□□ -2.29
CDKL5-207ENST00000624700 SCGB2B2Q4G0G5 96 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 SBSPONQ8IVN8 264 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 LYSMD1Q96S90 227 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 TAS2R7Q9NYW3 318 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 OR52A1Q9UKL2 312 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 PYCARDQ9ULZ3 195 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 ADGRG4Q8IZF6 3080 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 PHRF1Q9P1Y6 1649 aaKnown RBP0.74□□□□□ -2.29
CDKL5-207ENST00000624700 CHD7Q9P2D1 2997 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 CHD9Q3L8U1 2897 aa0.74□□□□□ -2.29
CDKL5-207ENST00000624700 GAPVD1Q14C86 1478 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 UHRF1BP1Q6BDS2 1440 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 UNC13CQ8NB66 2214 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 WIZO95785 1651 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 A0A087WSZ3 146 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 H3BRM9 83 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 TMEM256-PLSCR3K7ERE1 68 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 CST8O60676 142 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 NDUFC2O95298 119 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 COX7CP15954 63 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 HSD11B1P28845 292 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 DYNLT3P51808 116 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 GRINAQ7Z429 371 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 IFT20Q8IY31 132 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 OR5AS1Q8N127 324 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 NPCDR1Q9BY65 106 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 HSPB8Q9UJY1 196 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 MYO5AQ9Y4I1 1855 aaKnown RBP0.73□□□□□ -2.29
CDKL5-207ENST00000624700 KCPQ6ZWJ8 1503 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 CAMSAP2Q08AD1 1489 aa0.73□□□□□ -2.29
CDKL5-207ENST00000624700 ADGBQ8N7X0 1667 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 F8W1H4 67 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 IGLV3-1P01715 115 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 CXCL8P10145 99 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 CDK6Q00534 326 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 OR5D16Q8NGK9 328 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 ZMYM4Q5VZL5 1548 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 NISCHQ9Y2I1 1504 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 DCAF1Q9Y4B6 1507 aa0.72□□□□□ -2.29
CDKL5-207ENST00000624700 FAM135AQ9P2D6 1515 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 G3V2T6 193 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 M0R378 163 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 C1QBP02746 253 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 NCALDP61601 193 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 VBP1P61758 197 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 OR10AC1Q8NH08 325 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 PSMF1Q92530 271 aa0.71□□□□□ -2.3
CDKL5-207ENST00000624700 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
CDKL5-207ENST00000624700 SRRM2Q9UQ35 2752 aaKnown RBP0.7□□□□□ -2.3
CDKL5-207ENST00000624700 MYH2Q9UKX2 1941 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 FREM3P0C091 2139 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 ABCA4P78363 2273 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 DUXBA0A1W2PPF3 345 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 M0R233 179 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 BANF1O75531 89 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 ATG12O94817 140 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 IFNA14P01570 189 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 APOA2P02652 100 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 IFNA4P05014 189 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 CD2P06729 351 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 RAB5CP51148 216 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 ARF6P62330 175 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 KRTAP26-1Q6PEX3 210 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 PXT1Q8NFP0 134 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 OR10AG1Q8NH19 301 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 TMEM138Q9NPI0 162 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 FANCMQ8IYD8 2048 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 ZCCHC11Q5TAX3 1644 aaKnown RBP0.7□□□□□ -2.3
CDKL5-207ENST00000624700 DIP2AQ14689 1571 aa0.7□□□□□ -2.3
CDKL5-207ENST00000624700 TRAV27A0A087WT01 109 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 OR2T8A6NH00 312 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 MRPS15P82914 257 aaKnown RBP0.69□□□□□ -2.3
CDKL5-207ENST00000624700 SPATA8Q6RVD6 105 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 ZGRF1Q86YA3 2104 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 CEP19Q96LK0 163 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 PRRT1Q99946 306 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 OR2J1Q9GZK6 312 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 N4BP2Q86UW6 1770 aaPredicted RBP0.69□□□□□ -2.3
CDKL5-207ENST00000624700 YTHDC2Q9H6S0 1430 aaKnown RBP0.69□□□□□ -2.3
CDKL5-207ENST00000624700 PREX1Q8TCU6 1659 aa0.69□□□□□ -2.3
CDKL5-207ENST00000624700 LAMA5O15230 3695 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 TRAV5A0A0B4J249 113 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 CITO14578 2027 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 TACC2O95359 2948 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 NFYBP25208 207 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 CAPZBP47756 277 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 CACNA1EQ15878 2313 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 DHRS4L2Q6PKH6 230 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 ARPINQ7Z6K5 226 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 POP5Q969H6 163 aaKnown RBP0.68□□□□□ -2.3
CDKL5-207ENST00000624700 RAB37Q96AX2 223 aa0.68□□□□□ -2.3
CDKL5-207ENST00000624700 CCDC94Q9BW85 323 aaPredicted RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms