RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	FFAR4	Q5NUL3	377 aa		10.69	□□□□□ -0.7
ATRX-215	ENST00000624193	RPL7L1	Q6DKI1	246 aa	Known RBP	10.69	□□□□□ -0.7
ATRX-215	ENST00000624193	SSX7	Q7RTT5	188 aa		10.69	□□□□□ -0.7
ATRX-215	ENST00000624193	ST6GAL2	Q96JF0	529 aa		10.69	□□□□□ -0.7
ATRX-215	ENST00000624193	SH3BGRL3	Q9H299	93 aa		10.69	□□□□□ -0.7
ATRX-215	ENST00000624193	CYTL1	Q9NRR1	136 aa		10.69	□□□□□ -0.7
ATRX-215	ENST00000624193	TIMM9	Q9Y5J7	89 aa		10.69	□□□□□ -0.7
ATRX-215	ENST00000624193	CBY3	A6NI87	242 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	CXCL2	P19875	107 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	ATP6V0C	P27449	155 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	RAB2A	P61019	212 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	LCN15	Q6UWW0	184 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	HSD17B11	Q8NBQ5	300 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	SCGB1C1	Q8TD33	95 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	MRPL32	Q9BYC8	188 aa	Known RBP	10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	KRTAP1-5	Q9BYS1	174 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	RNF24	Q9Y225	148 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	FUT9	Q9Y231	359 aa		10.68	□□□□□ -0.7
ATRX-215	ENST00000624193	TRBV19	A0A075B6N1	114 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	PRAC2	D3DTV9	90 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	BOLA2-SMG1P6	H3BVE0	249 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	KRTAP10-2	P60368	255 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	ZNF266	Q14584	549 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	PSG3	Q16557	428 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	OR2G3	Q8NGZ4	309 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	FXYD5	Q96DB9	178 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	LINC01587	Q99440	93 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193		Q9H8V8	135 aa		10.67	□□□□□ -0.7
ATRX-215	ENST00000624193	HIST1H1E	P10412	219 aa	Known RBP	10.66	□□□□□ -0.7
ATRX-215	ENST00000624193	HTN1	P15515	57 aa		10.66	□□□□□ -0.7
ATRX-215	ENST00000624193	ZNF738	Q8NE65	137 aa		10.66	□□□□□ -0.7
ATRX-215	ENST00000624193	SLC50A1	Q9BRV3	221 aa		10.66	□□□□□ -0.7
ATRX-215	ENST00000624193	PSMG3	Q9BT73	122 aa	Predicted RBP	10.66	□□□□□ -0.7
ATRX-215	ENST00000624193	ZNF253	O75346	499 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	OR10J4	P0C629	311 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	TAS2R60	P59551	318 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	GUK1	Q16774	197 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	TTC32	Q5I0X7	151 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	TMEM256	Q8N2U0	113 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	KCNRG	Q8N5I3	272 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	RPUSD4	Q96CM3	377 aa	Known RBP	10.65	□□□□□ -0.7
ATRX-215	ENST00000624193	C16orf74	Q96GX8	76 aa		10.65	□□□□□ -0.7
ATRX-215	ENST00000624193		A0A1B0GVG6	124 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	HMSD	A8MTL9	139 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193		M0R3E3	92 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	M6PR	P20645	277 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	RHOB	P62745	196 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	HIST1H1A	Q02539	215 aa	Predicted RBP	10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	ZNF345	Q14585	488 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	OR8A1	Q8NGG7	326 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	PHYHIPL	Q96FC7	376 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	OR51M1	Q9H341	326 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193		Q9H3A6	140 aa		10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	APOB	P04114	4563 aa	Known RBP	10.64	□□□□□ -0.71
ATRX-215	ENST00000624193	hCG_2014768	A0A024R1R8	64 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	CD300C	Q08708	224 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	OR5I1	Q13606	314 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	PDE6H	Q13956	83 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	TCTE3	Q8IZS6	198 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	EXOC3-AS1	Q8N2X6	119 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	LRRC20	Q8TCA0	184 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	PAXX	Q9BUH6	204 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	NOP10	Q9NPE3	64 aa	Known RBP	10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	PPP1R14D	Q9NXH3	145 aa		10.63	□□□□□ -0.71
ATRX-215	ENST00000624193	TRAV26-1	A0A087WT03	109 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	NBEAP1	P0C6P0	100 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	BTF3	P20290	206 aa	Known RBP	10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	ZNF726P1	Q15940	193 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	FAM122C	Q6P4D5	195 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	OR10G4	Q8NGN3	311 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	OR10G9	Q8NGN4	311 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	OR10G7	Q8NGN6	311 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	RNASE8	Q8TDE3	154 aa	Known RBP	10.62	□□□□□ -0.71
ATRX-215	ENST00000624193	BLNK	Q8WV28	456 aa		10.62	□□□□□ -0.71
ATRX-215	ENST00000624193		A0A0J9YY99	117 aa		10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	EPM2A	B3EWF7	344 aa		10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	HMGB3	O15347	200 aa	Known RBP	10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	OR7C2	O60412	319 aa		10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	UBE2L3	P68036	154 aa	Known RBP	10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	SERF2	P84101	59 aa		10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	ZNF493	Q6ZR52	646 aa		10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	OR10J6P	Q8NGY7	276 aa		10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	TMEM263	Q8WUH6	116 aa	Known RBP	10.61	□□□□□ -0.71
ATRX-215	ENST00000624193	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193		A0A1W2PPQ1	181 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	NPIPB6	E9PJ23	425 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	TAAR5	O14804	337 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	KIR3DS1	Q14943	382 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	ESRG	Q1W209	222 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	KHDC3L	Q587J8	217 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	RXFP4	Q8TDU9	374 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	RAB24	Q969Q5	203 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	MRPL53	Q96EL3	112 aa	Known RBP	10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	UPK3B	Q9BT76	320 aa		10.6	□□□□□ -0.71
ATRX-215	ENST00000624193	STAG3L2	P0CL84	134 aa		10.59	□□□□□ -0.71
ATRX-215	ENST00000624193	STAG3L3	P0CL85	134 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms