RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 HS3ST6Q96QI5 342 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 TMEM95Q3KNT9 176 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 PRIMA1Q86XR5 153 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 TYMSP04818 313 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 IGF2BP2-AS1Q96M15 143 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 C20orf144Q9BQM9 153 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 HSD52Q0P140 79 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 PLXNA3P51805 1871 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 TICRRQ7Z2Z1 1910 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 HIVEP2P31629 2446 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 C15orf62A8K5M9 175 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 C22orf46C9J442 243 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 GP9P14770 177 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 NPC2P61916 151 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 DAZAP2Q15038 168 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 PIFOQ8TCI5 191 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 SNHG12Q9BXW3 62 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 DKK4Q9UBT3 224 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 POLR3KQ9Y2Y1 108 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 MYLKQ15746 1914 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 MED13LQ71F56 2210 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 IGHV7-4-1A0A0J9YVY3 117 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 HOXD3P31249 432 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 C8orf86Q6ZUL3 223 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 NHP2Q9NX24 153 aaKnown RBP7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 ZNF581Q9P0T4 197 aa7.82□□□□□ -1.16
CLTCL1-211ENST00000621271 PCNX2A6NKB5 2137 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 HOXB4P17483 251 aaPredicted RBP7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 C17orf58Q2M2W7 97 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 C10orf105Q8TEF2 133 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 SIGMAR1Q99720 223 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 CACNA1AO00555 2505 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 LGALS1P09382 135 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 ADORA2A-AS1P86434 159 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 SFTA2Q6UW10 78 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 NDUFA4L2Q9NRX3 87 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 TEX48A0A1B0GUV7 120 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 TRAV12-2A0A075B6T6 113 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 LEPROTO15243 131 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 THAP8Q8NA92 274 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 SPAG8Q99932 426 aaPredicted RBP7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 TMEM243Q9BU79 118 aa7.81□□□□□ -1.16
CLTCL1-211ENST00000621271 ZNRF2Q8NHG8 242 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 A0A096LPF7 62 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 A0A0G2JRQ6 117 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 CCL18P55774 89 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 TSC2P49815 1807 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 RPL32P62910 135 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 Q0VG73 95 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 FOXE3Q13461 319 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 DEFB136Q30KP8 78 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 MPV17L2Q567V2 206 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 Q86TA4 180 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 VOPP1Q96AW1 172 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 ATP6V0BQ99437 205 aa7.8□□□□□ -1.16
CLTCL1-211ENST00000621271 IGKV2D-24A0A075B6R9 120 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 ZNF503-AS2A6NEH8 195 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 GAGE6Q13070 117 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 TMEM14BQ9NUH8 114 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 PKIGQ9Y2B9 76 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 OTOGLQ3ZCN5 2332 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 ANGP03950 147 aaKnown RBP7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 IGHV4-38-2P0DP08 117 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 ATXN8Q156A1 80 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 Q6ZRM9 215 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 SPXQ9BT56 116 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 WDR86Q86TI4 376 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 C1orf147Q96MC9 270 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 ERG28Q9UKR5 140 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 FANCMQ8IYD8 2048 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 SAMD5Q5TGI4 173 aa7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 KLK5Q9Y337 293 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-211ENST00000621271 A0A0J9YY99 117 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 KIAA2026Q5HYC2 2103 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 FRMPD3Q5JV73 1810 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 IGKV1OR2-108A0A075B7D4 117 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 COX11Q9Y6N1 276 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 UBE2BP63146 152 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 KIAA1671Q9BY89 1806 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 ZGRF1Q86YA3 2104 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 VWA8A3KMH1 1905 aa7.78□□□□□ -1.16
CLTCL1-211ENST00000621271 SONP18583 2426 aaKnown RBP7.77□□□□□ -1.16
CLTCL1-211ENST00000621271 hDV102S1A0JD36 115 aa7.77□□□□□ -1.16
CLTCL1-211ENST00000621271 LRRK1Q38SD2 2015 aa7.77□□□□□ -1.16
CLTCL1-211ENST00000621271 FOXI2Q6ZQN5 318 aa7.77□□□□□ -1.16
CLTCL1-211ENST00000621271 NUP35Q8NFH5 326 aa7.77□□□□□ -1.16
CLTCL1-211ENST00000621271 ZNF479Q96JC4 524 aa7.77□□□□□ -1.16
CLTCL1-211ENST00000621271 PTPRDP23468 1912 aa7.77□□□□□ -1.17
CLTCL1-211ENST00000621271 CLPSL1A2RUU4 121 aa7.77□□□□□ -1.17
CLTCL1-211ENST00000621271 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
CLTCL1-211ENST00000621271 TNFRSF6BO95407 300 aa7.77□□□□□ -1.17
CLTCL1-211ENST00000621271 KLF5Q13887 457 aaPredicted RBP7.77□□□□□ -1.17
CLTCL1-211ENST00000621271 IL17DQ8TAD2 202 aa7.77□□□□□ -1.17
CLTCL1-211ENST00000621271 Q9HAA7 133 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms