RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	OR2D2	Q9H210	308 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	SRD5A3	Q9H8P0	318 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	TRAPPC2L	Q9UL33	140 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	C15orf62	A8K5M9	175 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	S1PR2	O95136	353 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	C3orf79	P0CE67	100 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	SSTR5	P35346	364 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	FXYD7	P58549	80 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	PLP1	P60201	277 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	FXYD3	Q14802	87 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	MRPL54	Q6P161	138 aa	Known RBP	4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	VSTM2A	Q8TAG5	236 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	RNF183	Q96D59	192 aa		4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	GEMIN7	Q9H840	131 aa	Known RBP	4.07	□□□□□ -1.76
CBWD3-215	ENST00000619322	MAP1LC3B2	A6NCE7	125 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322		H3BNG1	76 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	SPINT2	O43291	252 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	CRISP2	P16562	243 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	RPL23	P62829	140 aa	Known RBP	4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	MRPL23	Q16540	153 aa	Known RBP	4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	UTF1	Q5T230	341 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	TAF15	Q92804	592 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	C1orf43	Q9BWL3	253 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	MAP1LC3B	Q9GZQ8	125 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	SDF2L1	Q9HCN8	221 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	PSENEN	Q9NZ42	101 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	SPTBN1	Q01082	2364 aa	Known RBP	4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	BMPR1B	O00238	502 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	HBE1	P02100	147 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	TFF1	P04155	84 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	BCL2	P10415	239 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	GABRA2	P47869	451 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	ZNF138	P52744	262 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	GCSAML	Q5JQS6	135 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	AMTN	Q6UX39	209 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	BRD3OS	Q6XYD6	125 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	RPP25L	Q8N5L8	163 aa	Known RBP	4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	NHLRC2	Q8NBF2	726 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	SMIM12	Q96EX1	92 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	PYGO2	Q9BRQ0	406 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	UQCR10	Q9UDW1	63 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	SPTA1	P02549	2419 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	TRBV20-1	A0A075B6N2	111 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	TRAV41	A0A0B4J266	112 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	FNDC10	F2Z333	226 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	FCN1	O00602	326 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	GRP	P07492	148 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	TEX43	Q6ZNM6	134 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	ACY3	Q96HD9	319 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	C20orf144	Q9BQM9	153 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	GNB4	Q9HAV0	340 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	TMEM14B	Q9NUH8	114 aa		4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	F11R	Q9Y624	299 aa	Known RBP	4.06	□□□□□ -1.76
CBWD3-215	ENST00000619322	C2CD3	Q4AC94	2353 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	TRAV30	A0A087WSZ9	112 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	C11orf94	C9JXX5	98 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	OR9G9	P0C7N8	305 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	G6PC	P35575	357 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	HBG1	P69891	147 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	HBG2	P69892	147 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	RAB31	Q13636	194 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	CT45A1	Q5HYN5	189 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322		Q8N976	141 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	CT45A3	Q8NHU0	189 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	IL1F10	Q8WWZ1	152 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	ZNF503	Q96F45	646 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	NPCDR1	Q9BY65	106 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	SMAD5-AS1	Q9Y6J3	95 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	DNAH11	Q96DT5	4516 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	IGHV3-64D	A0A0J9YX35	117 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	PRSS29P	A6NIE9	313 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322		K7ERJ3	54 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	OVOL1	O14753	267 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	PAGE4	O60829	102 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	SLC38A11	Q08AI6	406 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	KLRD1	Q13241	179 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	ZNF479	Q96JC4	524 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	SGK494	Q96LW2	274 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	SPAG8	Q99932	426 aa	Predicted RBP	4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	TMEM147	Q9BVK8	224 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	TTTY13	Q9BZ97	58 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	WDR83OS	Q9Y284	106 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	AKAP6	Q13023	2319 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	SPTAN1	Q13813	2472 aa	Known RBP	4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322		A0A1B0GV72	72 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	SNURFL	B1AK76	121 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322		M0QXV9	152 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	TPPP2	P59282	170 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	ACTL10	Q5JWF8	245 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	ZNRF1	Q8ND25	227 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	RPE	Q96AT9	228 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	HARBI1	Q96MB7	349 aa		4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	MRPL27	Q9P0M9	148 aa	Known RBP	4.05	□□□□□ -1.76
CBWD3-215	ENST00000619322	IGLV11-55	A0A075B6I3	123 aa		4.04	□□□□□ -1.76
CBWD3-215	ENST00000619322	TRBV24-1	A0A075B6N3	115 aa		4.04	□□□□□ -1.76
CBWD3-215	ENST00000619322	TMSB15B	A0A087X1C1	80 aa		4.04	□□□□□ -1.76
CBWD3-215	ENST00000619322	IGLC7	A0M8Q6	106 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms