RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 LINC01545Q5VT33 79 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 SPATA12Q7Z6I5 190 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 OR5A1Q8NGJ0 315 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 OR1N2Q8NGR9 330 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 ZNF747Q9BV97 191 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 ONECUT1Q9UBC0 465 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 PPIAL4CA0A0B4J2A2 164 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 PSMB11A5LHX3 300 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 D6R8Y8 96 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 INS-IGF2F8WCM5 200 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 GNG7O60262 68 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 PPIAL4GP0DN37 164 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 C11orf71Q6IPW1 123 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 KAAG1Q9UBP8 84 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 C9orf118A6NHY6 69 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 H3BRM9 83 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 SMIM13P0DJ93 91 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 COX6B1P14854 86 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 FCER1GP30273 86 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 FCGR2BP31994 310 aaPredicted RBP5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 IFI27P40305 119 aaPredicted RBP5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 EFNA4P52798 201 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 LINC00322Q6ZN03 302 aaPredicted RBP5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 FER1L6-AS1Q8NA97 138 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 PRSS22Q9GZN4 317 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 C19orf71A6NCJ1 209 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 FBLL1A6NHQ2 334 aaKnown RBP5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 E7EUB6 86 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 IL4P05112 153 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 HES1Q14469 280 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 TMEM190Q8WZ59 177 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 MLST8Q9BVC4 326 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 CSTL1Q9H114 145 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 MAP1LC3AQ9H492 121 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 RABAC1Q9UI14 185 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 ABCA1O95477 2261 aa5.53□□□□□ -1.52
SRGAP3-213ENST00000618999 IGKV1D-37A0A075B6S9 117 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 A0A1B0GV72 72 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 GP9P14770 177 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 CCL19Q99731 98 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 TPSG1Q9NRR2 321 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 MRPL36Q9P0J6 103 aaKnown RBP5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 A0A1W2PRD5 423 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 A0A1W2PRF3 423 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 A0A1W2PRM7 423 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 VWC2LB2RUY7 222 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 ORM1P02763 201 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 DLX1P56177 255 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 PAX2Q02962 417 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 URB1-AS1Q96HZ7 61 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 C18orf15Q96N68 181 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 FBXL15Q9H469 300 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 IGLC1P0CG04 106 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 PRB4P10163 310 aaPredicted RBP5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 ATP5J2P56134 94 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 DIAPH2-AS1Q14236 149 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 PSMG4Q5JS54 123 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 FAM120AOSQ5T036 256 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 PPP1R27Q86WC6 154 aa5.52□□□□□ -1.53
SRGAP3-213ENST00000618999 K7EP34 96 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 TNFRSF13BO14836 293 aaPredicted RBP5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 ZNF207O43670 478 aaKnown RBP5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 MYCNOSP40205 109 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 C7orf69Q9H7B7 122 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 FCN3O75636 299 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 FXYD7P58549 80 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 PSG3Q16557 428 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 LGALS9BQ3B8N2 356 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 TMEM155Q4W5P6 130 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 LGALS9CQ6DKI2 356 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 AMN1Q8IY45 258 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 TMEM75Q8N9X5 138 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 ZC2HC1AQ96GY0 325 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 TMEM14CQ9P0S9 112 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 VCYO14598 125 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 SAP30O75446 220 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 BPESC1Q9GZL8 116 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 TMEM133Q9H2Q1 129 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 LINC00574Q9H8X3 128 aa5.51□□□□□ -1.53
SRGAP3-213ENST00000618999 ARHGAP32A7KAX9 2087 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 IGHV1-8P0DP01 117 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 PVRIGQ6DKI7 326 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 LYPD1Q8N2G4 141 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 SIGLEC9Q9Y336 463 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 TRBV19A0A075B6N1 114 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 SAMD13Q5VXD3 122 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 LINC00311Q8N616 119 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 NRGNQ92686 78 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 DPF1Q92782 380 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 SIGLEC8Q9NYZ4 499 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 CENPEQ02224 2701 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 PTPN13Q12923 2485 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 TMEM213A2RRL7 107 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 M0R3E3 92 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 RPL7P18124 248 aaKnown RBP5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 BCL6BQ8N143 479 aaPredicted RBP5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 SHANK2-AS3Q9BTD1 123 aa5.5□□□□□ -1.53
SRGAP3-213ENST00000618999 FAM104BQ5XKR9 115 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms