RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 I3L3M4 83 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 IGHV5-10-1A0A0J9YXX1 117 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 SRXN1Q9BYN0 137 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 FAM236DA0A1B0GTK5 79 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 H3BQ85 93 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 FAM236CP0DP71 79 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 C3orf36Q3SXR2 165 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 COL24A1Q17RW2 1714 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 Q8TAT8 98 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 PFN2P35080 140 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 NTF4P34130 210 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL5A1-208ENST00000618395 PCP2Q8IVA1 136 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 C3orf22Q8N5N4 141 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 NLRC5Q86WI3 1866 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 NDUFS7O75251 213 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 CD24P25063 80 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
COL5A1-208ENST00000618395 LTBP4Q8N2S1 1624 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 ADAMTS9Q9P2N4 1935 aa12.25□□□□□ -0.45
COL5A1-208ENST00000618395 TRBV19A0A075B6N1 114 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 LINC00479Q96M42 142 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 ATP5EP56381 51 aaPredicted RBP12.24□□□□□ -0.45
COL5A1-208ENST00000618395 NHSL1Q5SYE7 1610 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 SPG11Q96JI7 2443 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 IGKV1D-8A0A087WSZ0 117 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 A0A087WWL8 130 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 COA6Q5JTJ3 125 aaKnown RBP12.24□□□□□ -0.45
COL5A1-208ENST00000618395 CYYR1Q96J86 154 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 DKK2Q9UBU2 259 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 COX6B1P14854 86 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
COL5A1-208ENST00000618395 ZSWIM8A7E2V4 1837 aa12.23□□□□□ -0.45
COL5A1-208ENST00000618395 CFHR4Q92496 578 aa12.23□□□□□ -0.45
COL5A1-208ENST00000618395 IGHV1-45A0A0A0MS14 117 aa12.23□□□□□ -0.45
COL5A1-208ENST00000618395 SEC61GP60059 68 aa12.23□□□□□ -0.45
COL5A1-208ENST00000618395 CEP192Q8TEP8 1941 aa12.23□□□□□ -0.45
COL5A1-208ENST00000618395 COX6A1P12074 109 aa12.23□□□□□ -0.45
COL5A1-208ENST00000618395 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
COL5A1-208ENST00000618395 K7EMI3 77 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 CLUHP3Q96NS8 147 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 TMEM213A2RRL7 107 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 CFPP27918 469 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 UCNP55089 124 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 PLA2G2FQ9BZM2 168 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 PROP1O75360 226 aa12.22□□□□□ -0.45
COL5A1-208ENST00000618395 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 HERVK_113P63121 156 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 Q6ZT83 130 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 A0A0G2JMZ2 1700 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 LRRC37A2A6NM11 1700 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 LRRC37AA6NMS7 1700 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 B9A039 149 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 TDRG1Q3Y452 100 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 TMEM219Q86XT9 240 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 SPACA3Q8IXA5 215 aa12.21□□□□□ -0.45
COL5A1-208ENST00000618395 CSPG4Q6UVK1 2322 aa12.21□□□□□ -0.46
COL5A1-208ENST00000618395 OTOGLQ3ZCN5 2332 aa12.21□□□□□ -0.46
COL5A1-208ENST00000618395 THAP8Q8NA92 274 aa12.21□□□□□ -0.46
COL5A1-208ENST00000618395 E9PQ18 207 aa12.21□□□□□ -0.46
COL5A1-208ENST00000618395 RNF152Q8N8N0 203 aa12.21□□□□□ -0.46
COL5A1-208ENST00000618395 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
COL5A1-208ENST00000618395 IGKV1-9A0A0C4DH69 117 aa12.2□□□□□ -0.46
COL5A1-208ENST00000618395 TMEM92Q6UXU6 159 aa12.2□□□□□ -0.46
COL5A1-208ENST00000618395 C9orf139Q6ZV77 190 aa12.2□□□□□ -0.46
COL5A1-208ENST00000618395 LINC00643Q86TS7 51 aa12.2□□□□□ -0.46
COL5A1-208ENST00000618395 IGKV1-5P01602 117 aa12.2□□□□□ -0.46
COL5A1-208ENST00000618395 WDR87Q6ZQQ6 2873 aa12.2□□□□□ -0.46
COL5A1-208ENST00000618395 FNDC1Q4ZHG4 1894 aaPredicted RBP12.2□□□□□ -0.46
COL5A1-208ENST00000618395 C15orf62A8K5M9 175 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 MRPL14Q6P1L8 145 aaKnown RBP12.19□□□□□ -0.46
COL5A1-208ENST00000618395 NDUFA7O95182 113 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 TRBV7-1A0A0A6YYK4 115 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
COL5A1-208ENST00000618395 BUB3O43684 328 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 LINC00114Q6XXX2 140 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 HIGD1BQ9P298 99 aa12.19□□□□□ -0.46
COL5A1-208ENST00000618395 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 RSPO4Q2I0M5 234 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-208ENST00000618395 TECTAO75443 2155 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 SLC25A29Q8N8R3 303 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 WIPF3A6NGB9 483 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 IGHV3-11P01762 117 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 CCL19Q99731 98 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 IGKV1D-43A0A0B4J1Z2 117 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 CRYGCP07315 174 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 VPREB1P12018 145 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 CRYGSP22914 178 aa12.18□□□□□ -0.46
COL5A1-208ENST00000618395 WIPF2Q8TF74 440 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-208ENST00000618395 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 C5orf64Q2M2E5 130 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 H0YGX0 51 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 H0YJW9 148 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 H3BT86 120 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 MT-ATP8P03928 68 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms