RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CD28P10747 220 aa12.73□□□□□ -0.37
TRAPPC3-210ENST00000617904 FOLR2P14207 255 aa12.73□□□□□ -0.37
TRAPPC3-210ENST00000617904 TCTEX1D4Q5JR98 221 aa12.73□□□□□ -0.37
TRAPPC3-210ENST00000617904 IL36BQ9NZH7 164 aa12.73□□□□□ -0.37
TRAPPC3-210ENST00000617904 TRBV24-1A0A075B6N3 115 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 COLCA2A8K830 154 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 CCL24O00175 119 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 RAB5AP20339 215 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 SLURP1P55000 103 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 OR5I1Q13606 314 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 ELOBQ15370 118 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 RBPMS2Q6ZRY4 209 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 MLST8Q9BVC4 326 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
TRAPPC3-210ENST00000617904 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 A8MWL6 223 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 IGLV2-8P01709 118 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 PROK1P58294 105 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 RAB5BP61020 215 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 COX19Q49B96 90 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 SMUG1Q53HV7 270 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 CT83Q5H943 113 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 NDUFA11Q86Y39 141 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 NHLRC2Q8NBF2 726 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 SGK494Q96LW2 274 aa12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 CITED2Q99967 270 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 TMA7Q9Y2S6 64 aaKnown RBP12.71□□□□□ -0.37
TRAPPC3-210ENST00000617904 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 A0A1W2PRX2 142 aa12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 ZNF138P52744 262 aa12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 KRTAP10-3P60369 221 aa12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 RNF182Q8N6D2 247 aa12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 CITED1Q99966 193 aa12.7□□□□□ -0.38
TRAPPC3-210ENST00000617904 IGKV3-7A0A075B6H7 116 aa12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 TRAV8-1A0A0A6YYK1 113 aa12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 A0A1W2PPQ1 181 aa12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 PFN1P07737 140 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 C9orf47Q6ZRZ4 202 aa12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 C11orf44Q8N8P7 122 aa12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 RPP21Q9H633 154 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-210ENST00000617904 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 TRAV25A0A0B4J276 109 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 FAM3BP58499 235 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 RPS20P60866 119 aaKnown RBP12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 FHL3Q13643 280 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 FAM162BQ5T6X4 162 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 IGFL4Q6B9Z1 124 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 PRR25Q96S07 402 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 MS4A6AQ9H2W1 248 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 SAV1Q9H4B6 383 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 V9GYV3 84 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 WNK1Q9H4A3 2382 aa12.68□□□□□ -0.38
TRAPPC3-210ENST00000617904 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 ZNF705FA8MVS1 300 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 SOCS3O14543 225 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 CMC4P56277 68 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 C18orf65Q6ZTR6 163 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 WFDC3Q8IUB2 231 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 DLX4Q92988 240 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 BORCS7Q96B45 105 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 RAX2Q96IS3 184 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 ASCL2Q99929 193 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 GFRA4Q9GZZ7 299 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 SIGLEC8Q9NYZ4 499 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 NAT8BQ9UHF3 227 aa12.67□□□□□ -0.38
TRAPPC3-210ENST00000617904 TRBV7-9A0A0J9YWB2 115 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 OR4C46A6NHA9 309 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 Q6AWC8 147 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 TSKUQ8WUA8 353 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 PYGO2Q9BRQ0 406 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 SRD5A3Q9H8P0 318 aa12.66□□□□□ -0.38
TRAPPC3-210ENST00000617904 TGIF2-C20orf24A0A0A6YYL0 155 aa12.65□□□□□ -0.38
TRAPPC3-210ENST00000617904 PF4P02776 101 aa12.65□□□□□ -0.38
TRAPPC3-210ENST00000617904 YPEL4Q96NS1 127 aa12.65□□□□□ -0.38
TRAPPC3-210ENST00000617904 PRKDCP78527 4128 aaKnown RBP12.65□□□□□ -0.38
TRAPPC3-210ENST00000617904 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 C19orf71A6NCJ1 209 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 NPIPB6E9PJ23 425 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 K7EQG2 157 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 TFPI2P48307 235 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 WDR73Q6P4I2 378 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 245.5 ms