RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SLAQ13239 276 aa13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 PYY3Q5JQD4 70 aa13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 RBPMS2Q6ZRY4 209 aaKnown RBP13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 SIGLECL1Q8N7X8 197 aa13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 PEF1Q9UBV8 284 aaKnown RBP13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 TP53TG3Q9ULZ0 132 aa13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 PDZD2O15018 2839 aa13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 APCSP02743 223 aa13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 PRR31Q5SQ13 230 aa13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 SAPCD1Q5SSQ6 148 aa13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 ATP5L2Q7Z4Y8 100 aa13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 RPLP1P05386 114 aaKnown RBP13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 COTL1Q14019 142 aa13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 TM4SF20Q53R12 229 aa13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 SSBP4Q9BWG4 385 aaPredicted RBP13.24□□□□□ -0.29
PCDHGC3-205ENST00000617641 FAM231BA6NCW3 169 aa13.23□□□□□ -0.29
PCDHGC3-205ENST00000617641 FBLL1A6NHQ2 334 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-205ENST00000617641 F2Z2F3 143 aa13.23□□□□□ -0.29
PCDHGC3-205ENST00000617641 SH2D1AO60880 128 aa13.23□□□□□ -0.29
PCDHGC3-205ENST00000617641 COX8CQ7Z4L0 72 aa13.23□□□□□ -0.29
PCDHGC3-205ENST00000617641 CCDC168Q8NDH2 2452 aa13.23□□□□□ -0.29
PCDHGC3-205ENST00000617641 TMEM238LA0A1B0GVL6 79 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 TMEM89A2RUT3 159 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 ZNF80P51504 273 aaPredicted RBP13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 LINC00310P59036 64 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 HBBP68871 147 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 FAM162BQ5T6X4 162 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 C16orf92Q96LL3 132 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 SRIP30626 198 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 GPHB5Q86YW7 130 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 C14orf144Q96I85 54 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 SELENOKQ9Y6D0 94 aa13.22□□□□□ -0.29
PCDHGC3-205ENST00000617641 IGHV7-4-1A0A0J9YVY3 117 aa13.21□□□□□ -0.29
PCDHGC3-205ENST00000617641 RBAKDNA6NC62 111 aa13.21□□□□□ -0.29
PCDHGC3-205ENST00000617641 EDN2P20800 178 aa13.21□□□□□ -0.29
PCDHGC3-205ENST00000617641 DAZ1Q9NQZ3 744 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-205ENST00000617641 TLN2Q9Y4G6 2542 aa13.21□□□□□ -0.29
PCDHGC3-205ENST00000617641 A0A1W2PS18 150 aa13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 SERF1AO75920 110 aa13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 Q0VG73 95 aa13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 CDPF1Q6NVV7 123 aa13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 BAGE3Q86Y29 109 aa13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 MRPL53Q96EL3 112 aaKnown RBP13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 C20orf173Q96LM9 149 aa13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.3
PCDHGC3-205ENST00000617641 TMSB15BA0A087X1C1 80 aa13.2□□□□□ -0.3
PCDHGC3-205ENST00000617641 FOXA3P55318 350 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC3-205ENST00000617641 TMEM18Q96B42 140 aa13.2□□□□□ -0.3
PCDHGC3-205ENST00000617641 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
PCDHGC3-205ENST00000617641 AGPAT4-IT1Q9H0P7 198 aa13.2□□□□□ -0.3
PCDHGC3-205ENST00000617641 TCAPO15273 167 aa13.19□□□□□ -0.3
PCDHGC3-205ENST00000617641 FOXE3Q13461 319 aa13.19□□□□□ -0.3
PCDHGC3-205ENST00000617641 FAM106AQ4KMX7 169 aa13.19□□□□□ -0.3
PCDHGC3-205ENST00000617641 FLNAP21333 2647 aaKnown RBP13.19□□□□□ -0.3
PCDHGC3-205ENST00000617641 TMEM189A5PLL7 270 aa13.19□□□□□ -0.3
PCDHGC3-205ENST00000617641 RPL11P62913 178 aaKnown RBP13.19□□□□□ -0.3
PCDHGC3-205ENST00000617641 IGKV3-7A0A075B6H7 116 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 A8MWP6 167 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 ARMS2P0C7Q2 107 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 TPPP3Q9BW30 176 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 AKAP9Q99996 3911 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 SOCS3O14543 225 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 ELANEP08246 267 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 SMPXQ9UHP9 88 aa13.18□□□□□ -0.3
PCDHGC3-205ENST00000617641 HAX1O00165 279 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 RAB4AP20338 218 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 OR10J3Q5JRS4 329 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 ZNF738Q8NE65 137 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 ITPR2Q14571 2701 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 A0A1B0GUT8 65 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 K7EMT4 169 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 BMI1P35226 326 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 KRTAP1-1Q07627 177 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 LBHQ53QV2 105 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 TMEM78Q5T7P6 136 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 RCHY1Q96PM5 261 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 NRN1Q9NPD7 142 aa13.17□□□□□ -0.3
PCDHGC3-205ENST00000617641 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 ZNF138P52744 262 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 Q8N2B8 174 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 CLEC5AQ9NY25 188 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 ESDP10768 282 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 IQCJQ1A5X6 159 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 C9orf47Q6ZRZ4 202 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 FOXC2Q99958 501 aa13.16□□□□□ -0.3
PCDHGC3-205ENST00000617641 SONP18583 2426 aaKnown RBP13.15□□□□□ -0.3
PCDHGC3-205ENST00000617641 SRD5A1P18405 259 aa13.15□□□□□ -0.3
PCDHGC3-205ENST00000617641 REC114Q7Z4M0 266 aa13.15□□□□□ -0.3
PCDHGC3-205ENST00000617641 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
PCDHGC3-205ENST00000617641 C18orf32Q8TCD1 76 aa13.15□□□□□ -0.3
PCDHGC3-205ENST00000617641 UFC1Q9Y3C8 167 aa13.15□□□□□ -0.3
PCDHGC3-205ENST00000617641 DEFB1P60022 68 aa13.14□□□□□ -0.31
PCDHGC3-205ENST00000617641 Q6AWC8 147 aa13.14□□□□□ -0.31
PCDHGC3-205ENST00000617641 LYZL1Q6UWQ5 148 aa13.14□□□□□ -0.31
PCDHGC3-205ENST00000617641 C2orf88Q9BSF0 95 aa13.14□□□□□ -0.31
PCDHGC3-205ENST00000617641 ALKBH7Q9BT30 221 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms