RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 BEAN1Q3B7T3 259 aa8.77□□□□□ -1.01
PDPN-211ENST00000617617 C9orf66Q5T8R8 295 aa8.77□□□□□ -1.01
PDPN-211ENST00000617617 BAGE2Q86Y30 109 aa8.77□□□□□ -1.01
PDPN-211ENST00000617617 LINC00518Q8N0U6 118 aa8.77□□□□□ -1.01
PDPN-211ENST00000617617 ANAPC16Q96DE5 110 aa8.77□□□□□ -1.01
PDPN-211ENST00000617617 ZNF705FA8MVS1 300 aaPredicted RBP8.76□□□□□ -1.01
PDPN-211ENST00000617617 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 K7EN84 100 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 PPP1R2P9O14990 202 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 C12orf54Q6X4T0 127 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 FOXI2Q6ZQN5 318 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 ZNF738Q8NE65 137 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 SAV1Q9H4B6 383 aaPredicted RBP8.76□□□□□ -1.01
PDPN-211ENST00000617617 TUBA4BQ9H853 241 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 OR8A1Q8NGG7 326 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 IGKV2-40A0A087WW87 121 aaPredicted RBP8.76□□□□□ -1.01
PDPN-211ENST00000617617 C7orf77A4D0Y5 90 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 CXorf65A6NEN9 183 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 IGKV2D-40P01614 121 aaPredicted RBP8.76□□□□□ -1.01
PDPN-211ENST00000617617 ZNF138P52744 262 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 IGFL4Q6B9Z1 124 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 FAM24BQ8N5W8 94 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 OR10J6PQ8NGY7 276 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 PRR25Q96S07 402 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 VGLL1Q99990 258 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 GPR61Q9BZJ8 451 aa8.76□□□□□ -1.01
PDPN-211ENST00000617617 TRAV34A0A0B4J273 112 aa8.75□□□□□ -1.01
PDPN-211ENST00000617617 CRISP2P16562 243 aa8.75□□□□□ -1.01
PDPN-211ENST00000617617 AGPAT4-IT1Q9H0P7 198 aa8.75□□□□□ -1.01
PDPN-211ENST00000617617 A0A0J9YX75 114 aa8.75□□□□□ -1.01
PDPN-211ENST00000617617 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
PDPN-211ENST00000617617 SAP30O75446 220 aa8.75□□□□□ -1.01
PDPN-211ENST00000617617 DUSP14O95147 198 aaKnown RBP8.75□□□□□ -1.01
PDPN-211ENST00000617617 C3orf56Q8N813 242 aa8.75□□□□□ -1.01
PDPN-211ENST00000617617 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 MT-ND4LP03901 98 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 ADIRFQ15847 76 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 ATRAIDQ6UW56 229 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 GBGT1Q8N5D6 347 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 SFRP2Q96HF1 295 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 RPH3ALQ9UNE2 315 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 M0R036 132 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 CT83Q5H943 113 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 TMEM78Q5T7P6 136 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 PRNTQ86SH4 94 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 NDFIP1Q9BT67 221 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 MAP6D1Q9H9H5 199 aa8.74□□□□□ -1.01
PDPN-211ENST00000617617 FBN1P35555 2871 aaKnown RBP8.74□□□□□ -1.01
PDPN-211ENST00000617617 TRAV8-1A0A0A6YYK1 113 aa8.73□□□□□ -1.01
PDPN-211ENST00000617617 IZUMO1RA6ND01 250 aa8.73□□□□□ -1.01
PDPN-211ENST00000617617 CT45A10P0DMU9 189 aa8.73□□□□□ -1.01
PDPN-211ENST00000617617 PSMG4Q5JS54 123 aa8.73□□□□□ -1.01
PDPN-211ENST00000617617 OR4B1Q8NGF8 309 aa8.73□□□□□ -1.01
PDPN-211ENST00000617617 PGPEP1LA6NFU8 196 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 ZNF688P0C7X2 276 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 HLA-DRB4P13762 266 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 HLA-DRB4X5D2U9 266 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 ERCC8Q13216 396 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 RNF212Q495C1 297 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 ZC2HC1AQ96GY0 325 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 YPEL4Q96NS1 127 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 KLLNB2CW77 178 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 ODF3L2Q3SX64 289 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 EBLN2Q6P2I7 272 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
PDPN-211ENST00000617617 CD33P20138 364 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 LEPP41159 167 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 WFDC3Q8IUB2 231 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 C15orf54Q8N8G6 183 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 OR10G8Q8NGN5 311 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 ASCL2Q99929 193 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 SMCO4Q9NRQ5 59 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 V9GYV3 84 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 DNAH3Q8TD57 4116 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 IGKV3-7A0A075B6H7 116 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 TRAV9-1A0A075B6T8 112 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 Q6AWC8 147 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 AMTNQ6UX39 209 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 RPS10P5Q9NQ39 176 aa8.71□□□□□ -1.02
PDPN-211ENST00000617617 FAM231BA6NCW3 169 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 CXCL1P09341 107 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 CRIP1P50238 77 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 HIST1H1AQ02539 215 aaPredicted RBP8.7□□□□□ -1.02
PDPN-211ENST00000617617 IBA57Q5T440 356 aaKnown RBP8.7□□□□□ -1.02
PDPN-211ENST00000617617 FAM162BQ5T6X4 162 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 GFRA4Q9GZZ7 299 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 H3BMM0 161 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 TFPI2P48307 235 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 PRR31Q5SQ13 230 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 NUDT10Q8NFP7 164 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 NUDT11Q96G61 164 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 C8orf49Q96NF6 230 aa8.7□□□□□ -1.02
PDPN-211ENST00000617617 DEFB131AP59861 70 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 S100A12P80511 92 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 OR5I1Q13606 314 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 SGK494Q96LW2 274 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 WNK1Q9H4A3 2382 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms