RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NSD1Q96L73 2696 aaPredicted RBP5.94□□□□□ -1.46
NEK3-207ENST00000617054 TEP1Q99973 2627 aaKnown RBP5.94□□□□□ -1.46
NEK3-207ENST00000617054 TRAV8-2A0A0B4J237 113 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 GRIFINA4D1Z8 144 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 CSN1S1P47710 185 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 SYNJ2BPP57105 145 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 TMEM75Q8N9X5 138 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 NEU1Q99519 415 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 TPPP3Q9BW30 176 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 RHPN1-AS1Q9BWJ2 59 aa5.94□□□□□ -1.46
NEK3-207ENST00000617054 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 F6UB75 175 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 CAMPP49913 170 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 S100A7AQ86SG5 101 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 KLHDC1Q8N7A1 406 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 NUP35Q8NFH5 326 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
NEK3-207ENST00000617054 C20orf173Q96LM9 149 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 SSBP4Q9BWG4 385 aaPredicted RBP5.93□□□□□ -1.46
NEK3-207ENST00000617054 RNF24Q9Y225 148 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 TENM1Q9UKZ4 2725 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 AGRNO00468 2067 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 IGHV4OR15-8A0A075B7B6 117 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 A0A087WW49 117 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 A0A1W2PRX2 142 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 NDUFA4O00483 81 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 P01737 135 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 ZNF80P51504 273 aaPredicted RBP5.93□□□□□ -1.46
NEK3-207ENST00000617054 PSG9Q00887 426 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 PDE6HQ13956 83 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 TCTEX1D4Q5JR98 221 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 GPHB5Q86YW7 130 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 TMEM183AQ8IXX5 376 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 GTSF1Q8WW33 167 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 GLMPQ8WWB7 406 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 PGLYRP4Q96LB8 373 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 NOTCH3Q9UM47 2321 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 VWFP04275 2813 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 PRSS29PA6NIE9 313 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 IFITM10A6NMD0 228 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 SNURFLB1AK76 121 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 H3BUA1 57 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 Q6ZSV7 163 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 LYPD1Q8N2G4 141 aa5.93□□□□□ -1.46
NEK3-207ENST00000617054 TRRAPQ9Y4A5 3859 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 SMIM27A0A1W2PRY6 76 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 SLURP1P55000 103 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 OR2D3Q8NGH3 330 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 BTF3L4Q96K17 158 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 PRDM13Q9H4Q3 707 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 C19orf71A6NCJ1 209 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 K7EQM0 130 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 CD5LO43866 347 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 MEOX2P50222 304 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 ACTL10Q5JWF8 245 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 TMEM190Q8WZ59 177 aa5.92□□□□□ -1.46
NEK3-207ENST00000617054 F2Z2F3 143 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 GDF5OSQ5U4N7 250 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 TCEAL7Q9BRU2 100 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 MRPL18Q9H0U6 180 aaKnown RBP5.91□□□□□ -1.46
NEK3-207ENST00000617054 RPP21Q9H633 154 aaKnown RBP5.91□□□□□ -1.46
NEK3-207ENST00000617054 DAZ1Q9NQZ3 744 aaKnown RBP5.91□□□□□ -1.46
NEK3-207ENST00000617054 NAT8BQ9UHF3 227 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 C2CD3Q4AC94 2353 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 XKRY2A2RUG3 117 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 LY6G6DO95868 133 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 MALP21145 153 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 HOXD3P31249 432 aaPredicted RBP5.91□□□□□ -1.46
NEK3-207ENST00000617054 PRR25Q96S07 402 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 AGPAT4-IT1Q9H0P7 198 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 IGHV7-4-1A0A0J9YVY3 117 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 NUPR1O60356 82 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 TYMSP04818 313 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 FAM106AQ4KMX7 169 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 OR11H1Q8NG94 326 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 WIPF2Q8TF74 440 aaPredicted RBP5.91□□□□□ -1.46
NEK3-207ENST00000617054 GRAMD2BQ96HH9 432 aa5.91□□□□□ -1.46
NEK3-207ENST00000617054 UBE2CO00762 179 aa5.9□□□□□ -1.46
NEK3-207ENST00000617054 C1orf194Q5T5A4 169 aa5.9□□□□□ -1.46
NEK3-207ENST00000617054 FAM231DQ6ZW35 169 aa5.9□□□□□ -1.46
NEK3-207ENST00000617054 TMEM256Q8N2U0 113 aa5.9□□□□□ -1.46
NEK3-207ENST00000617054 ZNF738Q8NE65 137 aa5.9□□□□□ -1.46
NEK3-207ENST00000617054 TSKUQ8WUA8 353 aa5.9□□□□□ -1.46
NEK3-207ENST00000617054 TMEM213A2RRL7 107 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 SPRY2O43597 315 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 SH2D1AO60880 128 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 BRI3O95415 125 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 FABP4P15090 132 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 SLAQ13239 276 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 SMPXQ9UHP9 88 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 ZFP30Q9Y2G7 519 aa5.9□□□□□ -1.47
NEK3-207ENST00000617054 A0A087X0K7 114 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 IZUMO1RA6ND01 250 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 IGKV3-20P01619 116 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 S100A9P06702 114 aaKnown RBP5.89□□□□□ -1.47
NEK3-207ENST00000617054 HOXA5P20719 270 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 FOXA3P55318 350 aaPredicted RBP5.89□□□□□ -1.47
NEK3-207ENST00000617054 FOXE3Q13461 319 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 TMEM136Q6ZRR5 245 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 F8P00451 2351 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms