RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 C9orf47Q6ZRZ4 202 aa11.94□□□□□ -0.5
CBWD3-211ENST00000615061 GNPNAT1Q96EK6 184 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-211ENST00000615061 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
CBWD3-211ENST00000615061 HYLS1Q96M11 299 aa11.94□□□□□ -0.5
CBWD3-211ENST00000615061 TRAV12-3A0A0B4J271 114 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 PLAC8L1A1L4L8 177 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 JTBO76095 146 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 LEPP41159 167 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 TMEM256Q8N2U0 113 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 Q8TAT8 98 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 LINC00477Q96M19 166 aa11.93□□□□□ -0.5
CBWD3-211ENST00000615061 MBP02144 154 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 TAS2R60P59551 318 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 C2CD4CQ8TF44 421 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 TRAV10A0A0B4J240 114 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 PGPA6NDG6 321 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 IGLL5B9A064 214 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 TAAR5O14804 337 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 CD300CQ08708 224 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 BTN1A1Q13410 526 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 ZNF726P1Q15940 193 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 PRR9Q5T870 116 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 KCNRGQ8N5I3 272 aa11.92□□□□□ -0.5
CBWD3-211ENST00000615061 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 KLLNB2CW77 178 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 H7BYZ3 331 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 CSN1S1P47710 185 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 ZNF345Q14585 488 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 Q6ZQT7 251 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 LINC00476Q8WZB0 136 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 ST6GAL2Q96JF0 529 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 NIPSNAP3BQ9BS92 247 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 ZNF492Q9P255 531 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
CBWD3-211ENST00000615061 HMSDA8MTL9 139 aa11.9□□□□□ -0.5
CBWD3-211ENST00000615061 DIRC3C9JPN6 131 aa11.9□□□□□ -0.5
CBWD3-211ENST00000615061 GCHFRP30047 84 aa11.9□□□□□ -0.5
CBWD3-211ENST00000615061 Q6ZNX1 250 aa11.9□□□□□ -0.5
CBWD3-211ENST00000615061 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
CBWD3-211ENST00000615061 ARPC5LQ9BPX5 153 aa11.9□□□□□ -0.5
CBWD3-211ENST00000615061 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
CBWD3-211ENST00000615061 ACTR3CQ9C0K3 210 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-211ENST00000615061 C7orf71A4D174 169 aa11.9□□□□□ -0.51
CBWD3-211ENST00000615061 CRISP2P16562 243 aa11.9□□□□□ -0.51
CBWD3-211ENST00000615061 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.51
CBWD3-211ENST00000615061 GNG5P63218 68 aa11.9□□□□□ -0.51
CBWD3-211ENST00000615061 RNASE8Q8TDE3 154 aaKnown RBP11.9□□□□□ -0.51
CBWD3-211ENST00000615061 LY6G6CO95867 125 aa11.89□□□□□ -0.51
CBWD3-211ENST00000615061 SLC25A5P05141 298 aaKnown RBP11.89□□□□□ -0.51
CBWD3-211ENST00000615061 GPX1P07203 203 aa11.89□□□□□ -0.51
CBWD3-211ENST00000615061 ZNF138P52744 262 aa11.89□□□□□ -0.51
CBWD3-211ENST00000615061 ZNF324O75467 553 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-211ENST00000615061 IQCF2Q8IXL9 164 aa11.88□□□□□ -0.51
CBWD3-211ENST00000615061 CMTM2Q8TAZ6 248 aa11.88□□□□□ -0.51
CBWD3-211ENST00000615061 SUN5Q8TC36 379 aa11.88□□□□□ -0.51
CBWD3-211ENST00000615061 RXFP4Q8TDU9 374 aa11.88□□□□□ -0.51
CBWD3-211ENST00000615061 TMEM263Q8WUH6 116 aaKnown RBP11.88□□□□□ -0.51
CBWD3-211ENST00000615061 C16orf74Q96GX8 76 aa11.88□□□□□ -0.51
CBWD3-211ENST00000615061 TMPRSS5Q9H3S3 457 aa11.88□□□□□ -0.51
CBWD3-211ENST00000615061 APLNQ9ULZ1 77 aa11.88□□□□□ -0.51
CBWD3-211ENST00000615061 TEX48A0A1B0GUV7 120 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 RBAKDNA6NC62 111 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 CXorf1O96002 111 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 DEFB130BP0DP73 79 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 DEFB130AP0DP74 79 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 DAD1P61803 113 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 AKR1C8PQ5T2L2 129 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 hCG_2014768A0A024R1R8 64 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 IGHV4-4A0A075B6R2 117 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 TRAV8-1A0A0A6YYK1 113 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 HTN3P15516 51 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-211ENST00000615061 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
CBWD3-211ENST00000615061 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
CBWD3-211ENST00000615061 A0A0D9SG52 128 aa11.86□□□□□ -0.51
CBWD3-211ENST00000615061 LYRM9A8MSI8 78 aa11.86□□□□□ -0.51
CBWD3-211ENST00000615061 BCL2L11O43521 198 aa11.86□□□□□ -0.51
CBWD3-211ENST00000615061 FHITP49789 147 aa11.86□□□□□ -0.51
CBWD3-211ENST00000615061 ZNF493Q6ZR52 646 aa11.86□□□□□ -0.51
CBWD3-211ENST00000615061 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
CBWD3-211ENST00000615061 PYGO2Q9BRQ0 406 aa11.86□□□□□ -0.51
CBWD3-211ENST00000615061 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-211ENST00000615061 GGTLC3B5MD39 225 aa11.85□□□□□ -0.51
CBWD3-211ENST00000615061 NMBP08949 121 aa11.85□□□□□ -0.51
CBWD3-211ENST00000615061 TMEM167BQ9NRX6 74 aa11.85□□□□□ -0.51
CBWD3-211ENST00000615061 TIMM8BQ9Y5J9 83 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-211ENST00000615061 DNAH6Q9C0G6 4158 aa11.85□□□□□ -0.51
CBWD3-211ENST00000615061 KANTRA0A1W2PQU2 76 aa11.84□□□□□ -0.51
CBWD3-211ENST00000615061 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
CBWD3-211ENST00000615061 TMUB2Q71RG4 321 aa11.84□□□□□ -0.51
CBWD3-211ENST00000615061 CCDC28AQ8IWP9 274 aa11.84□□□□□ -0.51
CBWD3-211ENST00000615061 TCTE3Q8IZS6 198 aa11.84□□□□□ -0.51
CBWD3-211ENST00000615061 TVP23CQ96ET8 276 aa11.84□□□□□ -0.51
CBWD3-211ENST00000615061 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms