RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 HTN1P15515 57 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 ZC2HC1BQ5TFG8 222 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 OR4X2Q8NGF9 303 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 RNF5Q99942 180 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 VKORC1Q9BQB6 163 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 INS-IGF2F8WCM5 200 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 EGR2P11161 476 aaPredicted RBP9.88□□□□□ -0.83
MSH6-213ENST00000614496 TMEM219Q86XT9 240 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 PCP2Q8IVA1 136 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 DEFB125Q8N687 156 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 LOC107984156A0A0G2JMH3 177 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 SCGB1C2P0DMR2 95 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 ARL17AQ8IVW1 177 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 ARL6IP6Q8N6S5 226 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 IGKCP01834 107 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 GATA1P15976 413 aaPredicted RBP9.88□□□□□ -0.83
MSH6-213ENST00000614496 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 EEF1AKMT3Q96AZ1 226 aa9.88□□□□□ -0.83
MSH6-213ENST00000614496 NXT2Q9NPJ8 142 aaKnown RBP9.88□□□□□ -0.83
MSH6-213ENST00000614496 IGLV1-47P01700 117 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 TTTY13Q9BZ97 58 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 SCRT2Q9NQ03 307 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 OR11H12B2RN74 326 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 DPM2O94777 84 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 TNFRSF6BO95407 300 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 IGKV3-20P01619 116 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 TRGV3P03979 118 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 SAMD5Q5TGI4 173 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 OR11H1Q8NG94 326 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 OR9G4Q8NGQ1 327 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 OR11H2Q8NH07 326 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 WFDC12Q8WWY7 111 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 IL17RELQ6ZVW7 336 aa9.87□□□□□ -0.83
MSH6-213ENST00000614496 ATP5LO75964 103 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 PPBPP02775 128 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 MYCNOSP40205 109 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 SCGB3A1Q96QR1 104 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 TRAV26-2A0A0B4J265 109 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 G3V318 75 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 SPRY2O43597 315 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 PDE6HQ13956 83 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 C8orf31Q8N9H6 132 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 CSPG4Q6UVK1 2322 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 TTC9CQ8N5M4 171 aa9.86□□□□□ -0.83
MSH6-213ENST00000614496 RAB9AP51151 201 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 FAM74A4Q5TZK3 123 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 ANKRD11Q6UB99 2663 aaPredicted RBP9.85□□□□□ -0.83
MSH6-213ENST00000614496 TRAV40A0A0B4J280 105 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 NDUFS7O75251 213 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 SRD5A1P18405 259 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 DSCAML1Q8TD84 2053 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.85□□□□□ -0.83
MSH6-213ENST00000614496 K7EMI3 77 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 PRTN3P24158 256 aa9.85□□□□□ -0.83
MSH6-213ENST00000614496 LCNL1Q6ZST4 164 aa9.84□□□□□ -0.83
MSH6-213ENST00000614496 RNASE4P34096 147 aaKnown RBP9.84□□□□□ -0.83
MSH6-213ENST00000614496 Q1RN00 199 aa9.84□□□□□ -0.83
MSH6-213ENST00000614496 LGALS9BQ3B8N2 356 aa9.84□□□□□ -0.83
MSH6-213ENST00000614496 LGALS9CQ6DKI2 356 aa9.84□□□□□ -0.83
MSH6-213ENST00000614496 MTURNQ8N3F0 131 aa9.84□□□□□ -0.83
MSH6-213ENST00000614496 OR1N2Q8NGR9 330 aa9.84□□□□□ -0.83
MSH6-213ENST00000614496 SAP30O75446 220 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 DYNAPQ8N1N2 210 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 SLC50A1Q9BRV3 221 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 TMEM8BA6NDV4 472 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 H7C2G1 150 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 K7ERJ3 54 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 SRSF8Q9BRL6 282 aaKnown RBP9.83□□□□□ -0.84
MSH6-213ENST00000614496 CHAC1Q9BUX1 264 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 C7orf69Q9H7B7 122 aa9.83□□□□□ -0.84
MSH6-213ENST00000614496 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 ATP6V0E1O15342 81 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 TGFAP01135 160 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 APOMO95445 188 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 CRIP1P50238 77 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 JMJD8Q96S16 334 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 LAGE3Q14657 143 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 KHDC1LQ5JSQ8 128 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 FCN3O75636 299 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 RAXQ9Y2V3 346 aa9.82□□□□□ -0.84
MSH6-213ENST00000614496 CUL9Q8IWT3 2517 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 H3BRM9 83 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 CDKN1BP46527 198 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 EFNA4P52798 201 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 SRSF1Q07955 248 aaKnown RBP eCLIP9.81□□□□□ -0.846e-6■■■■□ 21.2
MSH6-213ENST00000614496 DTX2Q86UW9 622 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 C14orf178Q8N769 122 aaPredicted RBP9.81□□□□□ -0.84
MSH6-213ENST00000614496 K7EP13 123 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 ASIPP42127 132 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 ZNF479Q96JC4 524 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 CYSLTR1Q9Y271 337 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 RAI1Q7Z5J4 1906 aaPredicted RBP9.81□□□□□ -0.84
MSH6-213ENST00000614496 IGLV2-11P01706 119 aa9.81□□□□□ -0.84
MSH6-213ENST00000614496 EMP1P54849 157 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms