RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
SEMA3B-211ENST00000612509 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
SEMA3B-211ENST00000612509 AGPAT4-IT1Q9H0P7 198 aa12.91□□□□□ -0.34
SEMA3B-211ENST00000612509 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
SEMA3B-211ENST00000612509 STAG3L3P0CL85 134 aa12.9□□□□□ -0.34
SEMA3B-211ENST00000612509 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
SEMA3B-211ENST00000612509 CSN1S1P47710 185 aa12.9□□□□□ -0.34
SEMA3B-211ENST00000612509 LINC00477Q96M19 166 aa12.9□□□□□ -0.34
SEMA3B-211ENST00000612509 VGLL1Q99990 258 aa12.9□□□□□ -0.34
SEMA3B-211ENST00000612509 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
SEMA3B-211ENST00000612509 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 PLAC8L1A1L4L8 177 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 KLLNB2CW77 178 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 TAAR5O14804 337 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 AZU1P20160 251 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 ZNF345Q14585 488 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 TMEM78Q5T7P6 136 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 RAB24Q969Q5 203 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 C16orf74Q96GX8 76 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 OTORQ9NRC9 128 aa12.89□□□□□ -0.35
SEMA3B-211ENST00000612509 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 C7orf71A4D174 169 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 IGLL5B9A064 214 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 SLC25A5P05141 298 aaKnown RBP12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 HTN1P15515 57 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 CRISP2P16562 243 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 Q8TAT8 98 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 TMEM263Q8WUH6 116 aaKnown RBP12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 CYTL1Q9NRR1 136 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
SEMA3B-211ENST00000612509 RBAKDNA6NC62 111 aa12.87□□□□□ -0.35
SEMA3B-211ENST00000612509 TCTAP57738 103 aa12.87□□□□□ -0.35
SEMA3B-211ENST00000612509 BTN1A1Q13410 526 aa12.87□□□□□ -0.35
SEMA3B-211ENST00000612509 SSX7Q7RTT5 188 aa12.87□□□□□ -0.35
SEMA3B-211ENST00000612509 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
SEMA3B-211ENST00000612509 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
SEMA3B-211ENST00000612509 ACTR3CQ9C0K3 210 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-211ENST00000612509 IGHV4-4A0A075B6R2 117 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 LYRM9A8MSI8 78 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 DIRC3C9JPN6 131 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 LY6G6CO95867 125 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 GCHFRP30047 84 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 DAD1P61803 113 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 FAM74A1Q5RGS3 127 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 PRR9Q5T870 116 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 ZNF493Q6ZR52 646 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 KCNRGQ8N5I3 272 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 ZFAND2AQ8N6M9 145 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 PLA2G2EQ9NZK7 142 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 RPH3ALQ9UNE2 315 aa12.86□□□□□ -0.35
SEMA3B-211ENST00000612509 PGPA6NDG6 321 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 HMSDA8MTL9 139 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 NMBP08949 121 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 ZNF138P52744 262 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 CD300CQ08708 224 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 CMTM2Q8TAZ6 248 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 APLNQ9ULZ1 77 aa12.85□□□□□ -0.35
SEMA3B-211ENST00000612509 TRBV7-9A0A0J9YWB2 115 aa12.84□□□□□ -0.35
SEMA3B-211ENST00000612509 CTXND1A0A1B0GTU2 59 aa12.84□□□□□ -0.35
SEMA3B-211ENST00000612509 CXorf1O96002 111 aa12.84□□□□□ -0.35
SEMA3B-211ENST00000612509 GPX1P07203 203 aa12.84□□□□□ -0.35
SEMA3B-211ENST00000612509 ZNF726P1Q15940 193 aa12.84□□□□□ -0.35
SEMA3B-211ENST00000612509 AKR1C8PQ5T2L2 129 aa12.84□□□□□ -0.35
SEMA3B-211ENST00000612509 SUN5Q8TC36 379 aa12.84□□□□□ -0.35
SEMA3B-211ENST00000612509 RNASE4P34096 147 aaKnown RBP12.83□□□□□ -0.36
SEMA3B-211ENST00000612509 LGALS9CQ6DKI2 356 aa12.83□□□□□ -0.36
SEMA3B-211ENST00000612509 CCDC28AQ8IWP9 274 aa12.83□□□□□ -0.36
SEMA3B-211ENST00000612509 TMEM167BQ9NRX6 74 aa12.83□□□□□ -0.36
SEMA3B-211ENST00000612509 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-211ENST00000612509 BCL2L11O43521 198 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 HTN3P15516 51 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 GNG5P63218 68 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 GOLT1AQ6ZVE7 132 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 IQCF2Q8IXL9 164 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 ARL6IP6Q8N6S5 226 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 TMED6Q8WW62 240 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 ST6GAL2Q96JF0 529 aa12.82□□□□□ -0.36
SEMA3B-211ENST00000612509 VPS13DQ5THJ4 4388 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 A0A0D9SG52 128 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 Q6ZNX1 250 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 NOP10Q9NPE3 64 aaKnown RBP12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 LENEPQ9Y5L5 61 aa12.81□□□□□ -0.36
SEMA3B-211ENST00000612509 GGTLC3B5MD39 225 aa12.8□□□□□ -0.36
SEMA3B-211ENST00000612509 C5orf17Q8NAS9 161 aa12.8□□□□□ -0.36
SEMA3B-211ENST00000612509 ZNF680Q8NEM1 530 aa12.8□□□□□ -0.36
SEMA3B-211ENST00000612509 NDUFAF3Q9BU61 184 aa12.8□□□□□ -0.36
SEMA3B-211ENST00000612509 ZNF471Q9BX82 626 aaPredicted RBP12.8□□□□□ -0.36
SEMA3B-211ENST00000612509 SNURFLB1AK76 121 aa12.79□□□□□ -0.36
SEMA3B-211ENST00000612509 Q6ZQT7 251 aa12.79□□□□□ -0.36
SEMA3B-211ENST00000612509 EIF4E3Q8N5X7 224 aaKnown RBP12.79□□□□□ -0.36
SEMA3B-211ENST00000612509 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms