RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 TMEM8BA6NDV4 472 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 FAM201AQ5SY85 155 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 CFAP126Q5VTH2 177 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 Q6ZUT4 128 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 TMEM158Q8WZ71 300 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 HEATR1Q9H583 2144 aaKnown RBP9.36□□□□□ -0.91
TP53-220ENST00000610623 X6R8D5 127 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 SMKR1H3BMG3 65 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 KHDC1LQ5JSQ8 128 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 NUP37Q8NFH4 326 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 FOXC2Q99958 501 aa9.36□□□□□ -0.91
TP53-220ENST00000610623 URB1O60287 2271 aaKnown RBP9.35□□□□□ -0.91
TP53-220ENST00000610623 K7ENP7 123 aa9.35□□□□□ -0.91
TP53-220ENST00000610623 FAM27E3Q08E93 113 aa9.35□□□□□ -0.91
TP53-220ENST00000610623 PLGLAQ15195 96 aa9.35□□□□□ -0.91
TP53-220ENST00000610623 GFRALQ6UXV0 394 aa9.35□□□□□ -0.91
TP53-220ENST00000610623 COX8CQ7Z4L0 72 aa9.35□□□□□ -0.91
TP53-220ENST00000610623 TRBV7-3A0A075B6L6 115 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 A0A0G2JNJ9 132 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 K7EMI3 77 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 MAPKAPK5-AS1Q8N8E1 139 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 Q8NA96 180 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 C8orf49Q96NF6 230 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 CCL13Q99616 98 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 Q9UFV3 132 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 PRR14LQ5THK1 2151 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 HOXA3O43365 443 aaPredicted RBP9.34□□□□□ -0.91
TP53-220ENST00000610623 SPRY3O43610 288 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 SH2D1AO60880 128 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 MRGPRG-AS1Q2M3A8 158 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 FAM216BQ8N7L0 139 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 DLX4Q92988 240 aaPredicted RBP9.34□□□□□ -0.91
TP53-220ENST00000610623 RNF183Q96D59 192 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 ASCL2Q99929 193 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 TMEM133Q9H2Q1 129 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 U3KQE9 123 aa9.34□□□□□ -0.91
TP53-220ENST00000610623 TMSB15BA0A087X1C1 80 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 TRAV40A0A0B4J280 105 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 NCBP2LA6PVI3 153 aaKnown RBP9.33□□□□□ -0.92
TP53-220ENST00000610623 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
TP53-220ENST00000610623 GAGE5Q13069 117 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 GAGE6Q13070 117 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 RASL11BQ9BPW5 248 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 NBEAQ8NFP9 2946 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 XGP55808 180 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 TNFAIP6P98066 277 aaPredicted RBP9.33□□□□□ -0.92
TP53-220ENST00000610623 LINC00311Q8N616 119 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 C8orf31Q8N9H6 132 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 DEFB108BQ8NET1 73 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
TP53-220ENST00000610623 IGHV3-21A0A0B4J1V1 117 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 H3BRN7 92 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 IL4P05112 153 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 IGLC6P0CF74 106 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 PLNP26678 52 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 PDE6HQ13956 83 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 MORN3Q6PF18 240 aaPredicted RBP9.32□□□□□ -0.92
TP53-220ENST00000610623 NFE4Q86UQ8 179 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 PPDPFLQ8WWR9 84 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 RPEQ96AT9 228 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 TPSG1Q9NRR2 321 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 IGHV1-46P01743 117 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 Q8N8P6 123 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 ANAPC13Q9BS18 74 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
TP53-220ENST00000610623 MRPL35Q9NZE8 188 aaKnown RBP9.32□□□□□ -0.92
TP53-220ENST00000610623 PPIFP30405 207 aaKnown RBP9.31□□□□□ -0.92
TP53-220ENST00000610623 MYOZ3Q8TDC0 251 aa9.31□□□□□ -0.92
TP53-220ENST00000610623 AGRNO00468 2067 aa9.31□□□□□ -0.92
TP53-220ENST00000610623 MUC6Q6W4X9 2439 aa9.31□□□□□ -0.92
TP53-220ENST00000610623 A0A087WX48 190 aa9.31□□□□□ -0.92
TP53-220ENST00000610623 TEX36Q5VZQ5 186 aa9.31□□□□□ -0.92
TP53-220ENST00000610623 ZFHX2Q9C0A1 2572 aaPredicted RBP9.31□□□□□ -0.92
TP53-220ENST00000610623 RAI1Q7Z5J4 1906 aaPredicted RBP9.3□□□□□ -0.92
TP53-220ENST00000610623 SVILO95425 2214 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 M0R3E3 92 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 MRPS12O15235 138 aaKnown RBP9.3□□□□□ -0.92
TP53-220ENST00000610623 EGR2P11161 476 aaPredicted RBP9.3□□□□□ -0.92
TP53-220ENST00000610623 UCNP55089 124 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 FHL3Q13643 280 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 DIAPH2-AS1Q14236 149 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 RALYQ9UKM9 306 aaKnown RBP9.3□□□□□ -0.92
TP53-220ENST00000610623 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 IGKV1-17P01599 117 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 RBP4P02753 201 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 GATA3P23771 443 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 ZFAND6Q6FIF0 208 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 SS18L2Q9UHA2 77 aa9.3□□□□□ -0.92
TP53-220ENST00000610623 DMXL1Q9Y485 3027 aa9.29□□□□□ -0.92
TP53-220ENST00000610623 GVINP1Q7Z2Y8 2422 aa9.29□□□□□ -0.92
TP53-220ENST00000610623 I3L2K1 104 aa9.29□□□□□ -0.92
TP53-220ENST00000610623 MALP21145 153 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms