RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LEPP41159 167 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 MS4A6AQ9H2W1 248 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 DYNAPQ8N1N2 210 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 TMEM14CQ9P0S9 112 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 IGKV3-7A0A075B6H7 116 aa15.94■□□□□ 0.14
SSBP3-216ENST00000610401 IGKV2D-26A0A0A0MRZ7 120 aa15.94■□□□□ 0.14
SSBP3-216ENST00000610401 C3orf36Q3SXR2 165 aa15.94■□□□□ 0.14
SSBP3-216ENST00000610401 RPL24P83731 157 aaKnown RBP15.94■□□□□ 0.14
SSBP3-216ENST00000610401 Q8NA96 180 aa15.94■□□□□ 0.14
SSBP3-216ENST00000610401 GOSR1O95249 250 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 HBDP02042 147 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 C21orf62Q9NYP8 219 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 DOPEY2Q9Y3R5 2298 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 SORL1Q92673 2214 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 A0A0G2JLM5 398 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 PRR25Q96S07 402 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 TMEM160Q9NX00 188 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 NDUFS7O75251 213 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 FANCD2OSQ96PS1 177 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 DPM3Q9P2X0 92 aa15.93■□□□□ 0.14
SSBP3-216ENST00000610401 MFAP4P55083 255 aa15.92■□□□□ 0.14
SSBP3-216ENST00000610401 KAAG1Q9UBP8 84 aa15.92■□□□□ 0.14
SSBP3-216ENST00000610401 CSPG4Q6UVK1 2322 aa15.92■□□□□ 0.14
SSBP3-216ENST00000610401 FGF6P10767 208 aa15.92■□□□□ 0.14
SSBP3-216ENST00000610401 FOXC2Q99958 501 aa15.91■□□□□ 0.14
SSBP3-216ENST00000610401 DEFB1P60022 68 aa15.91■□□□□ 0.14
SSBP3-216ENST00000610401 CDSNQ15517 529 aa15.91■□□□□ 0.14
SSBP3-216ENST00000610401 IL17RELQ6ZVW7 336 aa15.91■□□□□ 0.14
SSBP3-216ENST00000610401 SMAD7O15105 426 aaKnown RBP15.9■□□□□ 0.14
SSBP3-216ENST00000610401 ARPC1AQ92747 370 aa15.9■□□□□ 0.14
SSBP3-216ENST00000610401 CSMD2Q7Z408 3487 aa15.9■□□□□ 0.14
SSBP3-216ENST00000610401 IGHV3OR16-10A0A075B7F0 116 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 NOTCH3Q9UM47 2321 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 CENPEQ02224 2701 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 AGRNO00468 2067 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 MRPS12O15235 138 aaKnown RBP15.89■□□□□ 0.13
SSBP3-216ENST00000610401 SFTA2Q6UW10 78 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 SPCS1Q9Y6A9 102 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 K7ERU9 68 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 TRGV3P03979 118 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 C5orf64Q2M2E5 130 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 PVRIGQ6DKI7 326 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 OR2K2Q8NGT1 345 aa15.89■□□□□ 0.13
SSBP3-216ENST00000610401 HOXB4P17483 251 aaPredicted RBP15.88■□□□□ 0.13
SSBP3-216ENST00000610401 FXYD2P54710 66 aa15.88■□□□□ 0.13
SSBP3-216ENST00000610401 SMAD5-AS1Q9Y6J3 95 aa15.88■□□□□ 0.13
SSBP3-216ENST00000610401 A6NDN8 102 aa15.88■□□□□ 0.13
SSBP3-216ENST00000610401 B9A039 149 aa15.88■□□□□ 0.13
SSBP3-216ENST00000610401 C8orf31Q8N9H6 132 aa15.88■□□□□ 0.13
SSBP3-216ENST00000610401 CLEC3BP05452 202 aa15.87■□□□□ 0.13
SSBP3-216ENST00000610401 NHP2Q9NX24 153 aaKnown RBP15.87■□□□□ 0.13
SSBP3-216ENST00000610401 F8W735 103 aaPredicted RBP15.87■□□□□ 0.13
SSBP3-216ENST00000610401 TMEM158Q8WZ71 300 aa15.87■□□□□ 0.13
SSBP3-216ENST00000610401 G3V318 75 aa15.87■□□□□ 0.13
SSBP3-216ENST00000610401 C16orf54Q6UWD8 224 aa15.87■□□□□ 0.13
SSBP3-216ENST00000610401 CCL21O00585 134 aa15.86■□□□□ 0.13
SSBP3-216ENST00000610401 LINC01548A6NM66 108 aa15.86■□□□□ 0.13
SSBP3-216ENST00000610401 EFNA4P52798 201 aa15.86■□□□□ 0.13
SSBP3-216ENST00000610401 FOXC1Q12948 553 aa15.86■□□□□ 0.13
SSBP3-216ENST00000610401 CLEC19AQ6UXS0 136 aa15.86■□□□□ 0.13
SSBP3-216ENST00000610401 TRAV40A0A0B4J280 105 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 NDUFA3O95167 84 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 CELSR2Q9HCU4 2923 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 C9orf118A6NHY6 69 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 CTSGP08311 255 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 C15orf32Q32M92 178 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 ZC2HC1BQ5TFG8 222 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 GTF2H5Q6ZYL4 71 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 CFHR4Q92496 578 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 MAP1LC3AQ9H492 121 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 HIVEP3Q5T1R4 2406 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 WI2-2373I1.2A0A1W2PRP0 233 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 TNFRSF6BO95407 300 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 RPL7P18124 248 aaKnown RBP15.85■□□□□ 0.13
SSBP3-216ENST00000610401 BOD1L2Q8IYS8 172 aa15.85■□□□□ 0.13
SSBP3-216ENST00000610401 TNFRSF14Q92956 283 aa15.84■□□□□ 0.13
SSBP3-216ENST00000610401 SEC11AP67812 179 aa15.84■□□□□ 0.13
SSBP3-216ENST00000610401 SMIM15Q7Z3B0 74 aa15.84■□□□□ 0.13
SSBP3-216ENST00000610401 IGHG4P01861 327 aa15.83■□□□□ 0.12
SSBP3-216ENST00000610401 LGALS9BQ3B8N2 356 aa15.83■□□□□ 0.12
SSBP3-216ENST00000610401 LGALS9CQ6DKI2 356 aa15.83■□□□□ 0.12
SSBP3-216ENST00000610401 HIF1ANQ9NWT6 349 aa15.83■□□□□ 0.12
SSBP3-216ENST00000610401 IGLV11-55A0A075B6I3 123 aa15.83■□□□□ 0.12
SSBP3-216ENST00000610401 LY6LH3BQJ8 138 aa15.83■□□□□ 0.12
SSBP3-216ENST00000610401 WFDC12Q8WWY7 111 aa15.83■□□□□ 0.12
SSBP3-216ENST00000610401 TMEM8BA6NDV4 472 aa15.82■□□□□ 0.12
SSBP3-216ENST00000610401 Q6AWC8 147 aa15.82■□□□□ 0.12
SSBP3-216ENST00000610401 AMTNQ6UX39 209 aa15.82■□□□□ 0.12
SSBP3-216ENST00000610401 DTX2Q86UW9 622 aa15.82■□□□□ 0.12
SSBP3-216ENST00000610401 OR1N2Q8NGR9 330 aa15.82■□□□□ 0.12
SSBP3-216ENST00000610401 C11orf21Q9P2W6 132 aa15.82■□□□□ 0.12
SSBP3-216ENST00000610401 IGF1P05019 195 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 HSD52Q0P140 79 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 ADAMTSL5Q6ZMM2 481 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 ZNF493Q6ZR52 646 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 VMO1Q7Z5L0 202 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 TMEM219Q86XT9 240 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 LYPD1Q8N2G4 141 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 GLMPQ8WWB7 406 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 RNF185Q96GF1 192 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms