RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 RAB4AP20338 218 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 HBBP68871 147 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 SLAQ13239 276 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 KHDC1LQ5JSQ8 128 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 DMRTA1Q5VZB9 504 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 PRR27Q6MZM9 219 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 LCNL1Q6ZST4 164 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 OR4F17Q8NGA8 305 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 VN1R17PQ8TDU5 208 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 SHANK2-AS3Q9BTD1 123 aa8.14□□□□□ -1.11
LINC01001-203ENST00000607448 TSSC4Q9Y5U2 329 aaPredicted RBP8.14□□□□□ -1.11
LINC01001-203ENST00000607448 NPIPB6E9PJ23 425 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 H3BRN7 92 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 K7EQM0 130 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 PMCHP20382 165 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 KRTDAPP60985 99 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 RBPMS2Q6ZRY4 209 aaKnown RBP8.13□□□□□ -1.11
LINC01001-203ENST00000607448 Q86TA4 180 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 BPIFA4PQ86YQ2 179 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
LINC01001-203ENST00000607448 ALKBH7Q9BT30 221 aaPredicted RBP8.13□□□□□ -1.11
LINC01001-203ENST00000607448 NOTCH3Q9UM47 2321 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 NPIPB5A8MRT5 1133 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 K7EIM0 57 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 IGKV1-17P01599 117 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 PF4V1P10720 104 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 IGLL1P15814 213 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 NUTF2P61970 127 aaKnown RBP8.12□□□□□ -1.11
LINC01001-203ENST00000607448 KPRPQ5T749 579 aaPredicted RBP8.12□□□□□ -1.11
LINC01001-203ENST00000607448 NIT1Q86X76 327 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 Q8N976 141 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 FAM103A1Q9BTL3 118 aaKnown RBP8.12□□□□□ -1.11
LINC01001-203ENST00000607448 SNHG12Q9BXW3 62 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 RPH3ALQ9UNE2 315 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 ZFP30Q9Y2G7 519 aa8.12□□□□□ -1.11
LINC01001-203ENST00000607448 IGHV3-21A0A0B4J1V1 117 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 EREGO14944 169 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 HSBP1O75506 76 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 SCGB2A1O75556 95 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 APELAP0DMC3 54 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 S100A7P31151 101 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 PMCHL1Q16048 86 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 GDF5OSQ5U4N7 250 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 C16orf54Q6UWD8 224 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 ZNF705AQ6ZN79 300 aaPredicted RBP8.11□□□□□ -1.11
LINC01001-203ENST00000607448 C8orf86Q6ZUL3 223 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 ARL6IP6Q8N6S5 226 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 TMEM75Q8N9X5 138 aa8.11□□□□□ -1.11
LINC01001-203ENST00000607448 TRBV19A0A075B6N1 114 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 A0A1B0GW15 77 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 SERTM2A0A1B0GWG4 89 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 WI2-2373I1.2A0A1W2PRP0 233 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 C20orf202A1L168 122 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 PF4P02776 101 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 RPLP1P05386 114 aaKnown RBP8.1□□□□□ -1.11
LINC01001-203ENST00000607448 C3orf79P0CE67 100 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 MFAP4P55083 255 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 CFHR3Q02985 330 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 C5orf64Q2M2E5 130 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 LEMD1Q68G75 181 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 WFDC9Q8NEX5 89 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 RNF125Q96EQ8 232 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 DUX3Q96PT4 197 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 FBLL1A6NHQ2 334 aaKnown RBP8.1□□□□□ -1.11
LINC01001-203ENST00000607448 HLA-DRB1P01911 266 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 IGLC2P0DOY2 106 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 CD33P20138 364 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 FOXA3P55318 350 aaPredicted RBP8.1□□□□□ -1.11
LINC01001-203ENST00000607448 NDPQ00604 133 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 PDE6HQ13956 83 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 TCF24Q7RTU0 167 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 LINC00482Q8N8I6 264 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 ZNF491Q8N8L2 437 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 CHCHD1Q96BP2 118 aaKnown RBP8.1□□□□□ -1.11
LINC01001-203ENST00000607448 PAM16Q9Y3D7 125 aa8.1□□□□□ -1.11
LINC01001-203ENST00000607448 IGLV11-55A0A075B6I3 123 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 IGHV7-81A0A0B4J1V7 117 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 G3V318 75 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 ATP6V0E1O15342 81 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 IGLV2-11P01706 119 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 CTRLP40313 264 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 CAMPP49913 170 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 DEFB136Q30KP8 78 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 Q6AWC8 147 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 ZNF562Q6V9R5 426 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.11
LINC01001-203ENST00000607448 GOLT1AQ6ZVE7 132 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 TTC9CQ8N5M4 171 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 GATD1Q8NB37 220 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 KLHL30-AS1Q8NEE0 82 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 ARPC1AQ92747 370 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 NDFIP1Q9BT67 221 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 THYN1Q9P016 225 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 UQCR10Q9UDW1 63 aa8.09□□□□□ -1.11
LINC01001-203ENST00000607448 M0R2Z0 102 aa8.08□□□□□ -1.12
LINC01001-203ENST00000607448 CHEK1O14757 476 aa8.08□□□□□ -1.12
LINC01001-203ENST00000607448 MRPS12O15235 138 aaKnown RBP8.08□□□□□ -1.12
LINC01001-203ENST00000607448 TCAPO15273 167 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms