RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 APLNQ9ULZ1 77 aa9.11□□□□□ -0.95
SHROOM1-207ENST00000606676 A0A1W2PPV4 95 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 KLLNB2CW77 178 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 IGLL5B9A064 214 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 H7BYZ3 331 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 J3KRW8 73 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 HTN1P15515 57 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 NIPSNAP3BQ9BS92 247 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 CYTL1Q9NRR1 136 aa9.1□□□□□ -0.95
SHROOM1-207ENST00000606676 TRAV12-3A0A0B4J271 114 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 TEX48A0A1B0GUV7 120 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 ARPC5O15511 151 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 LY6G6CO95867 125 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 MBP02144 154 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 STAG3L2P0CL84 134 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 STAG3L3P0CL85 134 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 CRISP2P16562 243 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 CDC34P49427 236 aaPredicted RBP9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 TCTAP57738 103 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 OR11H4Q8NGC9 324 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 RNASE8Q8TDE3 154 aaKnown RBP9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 RAB24Q969Q5 203 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 ZNF492Q9P255 531 aa9.09□□□□□ -0.95
SHROOM1-207ENST00000606676 IGHV4-4A0A075B6R2 117 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 BORCS7-ASMTA0A0B4J1R7 106 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 LYRM9A8MSI8 78 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 SLC25A5P05141 298 aaKnown RBP9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 NMBP08949 121 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 ARL14EPLP0DKL9 152 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 CD300CQ08708 224 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 TMEM78Q5T7P6 136 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 PRR9Q5T870 116 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 ZNF493Q6ZR52 646 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 SSX7Q7RTT5 188 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 ZFAND2AQ8N6M9 145 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 SUN5Q8TC36 379 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 OTORQ9NRC9 128 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 DNAH6Q9C0G6 4158 aa9.08□□□□□ -0.96
SHROOM1-207ENST00000606676 C7orf71A4D174 169 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 RBAKDNA6NC62 111 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 PGPA6NDG6 321 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 DIRC3C9JPN6 131 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 TAAR5O14804 337 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 CSN1S1P47710 185 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 ZNF138P52744 262 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 DAD1P61803 113 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 BTN1A1Q13410 526 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 LGALS9CQ6DKI2 356 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 Q8TAT8 98 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 TMEM263Q8WUH6 116 aaKnown RBP9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 HYLS1Q96M11 299 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 DNAH10Q8IVF4 4471 aa9.07□□□□□ -0.96
SHROOM1-207ENST00000606676 TRBV7-9A0A0J9YWB2 115 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 HMSDA8MTL9 139 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 GPX1P07203 203 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 RNASE4P34096 147 aaKnown RBP9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 ZNF345Q14585 488 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 Q6ZQT7 251 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 KCNRGQ8N5I3 272 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 PYGO2Q9BRQ0 406 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 ACTR3CQ9C0K3 210 aaPredicted RBP9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 TIMM8BQ9Y5J9 83 aaPredicted RBP9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 DNAH2Q9P225 4427 aa9.06□□□□□ -0.96
SHROOM1-207ENST00000606676 DEFB130BP0DP73 79 aa9.05□□□□□ -0.96
SHROOM1-207ENST00000606676 DEFB130AP0DP74 79 aa9.05□□□□□ -0.96
SHROOM1-207ENST00000606676 GCHFRP30047 84 aa9.05□□□□□ -0.96
SHROOM1-207ENST00000606676 CCDC28AQ8IWP9 274 aa9.05□□□□□ -0.96
SHROOM1-207ENST00000606676 ARL6IP6Q8N6S5 226 aa9.05□□□□□ -0.96
SHROOM1-207ENST00000606676 LINC00467Q9BRT7 94 aa9.05□□□□□ -0.96
SHROOM1-207ENST00000606676 NOP10Q9NPE3 64 aaKnown RBP9.05□□□□□ -0.96
SHROOM1-207ENST00000606676 EPPK1P58107 5090 aaKnown RBP9.04□□□□□ -0.96
SHROOM1-207ENST00000606676 FRAS1Q86XX4 4008 aa9.04□□□□□ -0.96
SHROOM1-207ENST00000606676 CXorf1O96002 111 aa9.04□□□□□ -0.96
SHROOM1-207ENST00000606676 HTN3P15516 51 aa9.04□□□□□ -0.96
SHROOM1-207ENST00000606676 FAM74A1Q5RGS3 127 aa9.04□□□□□ -0.96
SHROOM1-207ENST00000606676 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
SHROOM1-207ENST00000606676 ARPC5LQ9BPX5 153 aa9.04□□□□□ -0.96
SHROOM1-207ENST00000606676 GNG5P63218 68 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 ANXA2RQ3ZCQ2 193 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 Q6ZNX1 250 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 CMTM2Q8TAZ6 248 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 TMED6Q8WW62 240 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 ST6GAL2Q96JF0 529 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 FAM210BQ96KR6 192 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 NDUFAF3Q9BU61 184 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
SHROOM1-207ENST00000606676 TRAV8-1A0A0A6YYK1 113 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 A0A0D9SG52 128 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 CTXND1A0A1B0GTU2 59 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms