RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 VPS13DQ5THJ4 4388 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 DEFB130BP0DP73 79 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 DEFB130AP0DP74 79 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 CSN1S1P47710 185 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 TMEM78Q5T7P6 136 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 HYLS1Q96M11 299 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 C20orf144Q9BQM9 153 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 TNFSF18Q9UNG2 199 aa10.25□□□□□ -0.77
TUBE1-208ENST00000604743 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 LYRM9A8MSI8 78 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 SMLR1H3BR10 107 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
TUBE1-208ENST00000604743 CDC34P49427 236 aaPredicted RBP10.24□□□□□ -0.77
TUBE1-208ENST00000604743 BTN1A1Q13410 526 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 RPL7L1Q6DKI1 246 aaKnown RBP10.24□□□□□ -0.77
TUBE1-208ENST00000604743 C9orf47Q6ZRZ4 202 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 CCDC28AQ8IWP9 274 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 SH3BGRL3Q9H299 93 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 KMT2AQ03164 3969 aa10.24□□□□□ -0.77
TUBE1-208ENST00000604743 BORCS7-ASMTA0A0B4J1R7 106 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 C7orf71A4D174 169 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 PGPA6NDG6 321 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 SLC25A5P05141 298 aaKnown RBP10.23□□□□□ -0.77
TUBE1-208ENST00000604743 GPX1P07203 203 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 CD300CQ08708 224 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
TUBE1-208ENST00000604743 PQLC2Q6ZP29 291 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 LYPD1Q8N2G4 141 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 OR2G3Q8NGZ4 309 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 Q8TAT8 98 aa10.23□□□□□ -0.77
TUBE1-208ENST00000604743 TMEM263Q8WUH6 116 aaKnown RBP10.23□□□□□ -0.77
TUBE1-208ENST00000604743 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
TUBE1-208ENST00000604743 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
TUBE1-208ENST00000604743 TIMM8BQ9Y5J9 83 aaPredicted RBP10.23□□□□□ -0.77
TUBE1-208ENST00000604743 G3V3Q6 166 aa10.22□□□□□ -0.77
TUBE1-208ENST00000604743 ARPC5O15511 151 aa10.22□□□□□ -0.77
TUBE1-208ENST00000604743 ARL14EPLP0DKL9 152 aa10.22□□□□□ -0.77
TUBE1-208ENST00000604743 Q6ZNX1 250 aa10.22□□□□□ -0.77
TUBE1-208ENST00000604743 ZNF493Q6ZR52 646 aa10.22□□□□□ -0.77
TUBE1-208ENST00000604743 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
TUBE1-208ENST00000604743 FAM19A4Q96LR4 140 aa10.22□□□□□ -0.77
TUBE1-208ENST00000604743 ZNF492Q9P255 531 aa10.22□□□□□ -0.77
TUBE1-208ENST00000604743 KLLNB2CW77 178 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 MBP02144 154 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 ZNF138P52744 262 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 SERF2P84101 59 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 FAM74A1Q5RGS3 127 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 CMTM2Q8TAZ6 248 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 RAB24Q969Q5 203 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 PYGO2Q9BRQ0 406 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 OTORQ9NRC9 128 aa10.21□□□□□ -0.77
TUBE1-208ENST00000604743 SNURFLB1AK76 121 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 DIRC3C9JPN6 131 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 F5H768 121 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 STAG3L2P0CL84 134 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 STAG3L3P0CL85 134 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 CRISP2P16562 243 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 PRR9Q5T870 116 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 Q6ZQT7 251 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 RXFP4Q8TDU9 374 aa10.2□□□□□ -0.78
TUBE1-208ENST00000604743 GNPNAT1Q96EK6 184 aaPredicted RBP10.2□□□□□ -0.78
TUBE1-208ENST00000604743 ACTR3CQ9C0K3 210 aaPredicted RBP10.2□□□□□ -0.78
TUBE1-208ENST00000604743 CBY3A6NI87 242 aa10.19□□□□□ -0.78
TUBE1-208ENST00000604743 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
TUBE1-208ENST00000604743 GNG5P63218 68 aa10.19□□□□□ -0.78
TUBE1-208ENST00000604743 TMEM88Q6PEY1 159 aa10.19□□□□□ -0.78
TUBE1-208ENST00000604743 IQCF2Q8IXL9 164 aa10.19□□□□□ -0.78
TUBE1-208ENST00000604743 ZFAND2AQ8N6M9 145 aa10.19□□□□□ -0.78
TUBE1-208ENST00000604743 DNAH6Q9C0G6 4158 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 RBAKDNA6NC62 111 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 RGS13O14921 159 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 GAGE7O76087 117 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 ATP5G1P05496 136 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 NMBP08949 121 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 GCHFRP30047 84 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 ATP5G3P48201 142 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 SSX7Q7RTT5 188 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 EIF4E3Q8N5X7 224 aaKnown RBP10.18□□□□□ -0.78
TUBE1-208ENST00000604743 FAM210BQ96KR6 192 aa10.18□□□□□ -0.78
TUBE1-208ENST00000604743 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
TUBE1-208ENST00000604743 TAAR5O14804 337 aa10.17□□□□□ -0.78
TUBE1-208ENST00000604743 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
TUBE1-208ENST00000604743 GSN-AS1Q9NRJ2 163 aa10.17□□□□□ -0.78
TUBE1-208ENST00000604743 TP53TG3Q9ULZ0 132 aa10.17□□□□□ -0.78
TUBE1-208ENST00000604743 IGHV1OR15-1A0A075B7D0 117 aa10.16□□□□□ -0.78
TUBE1-208ENST00000604743 CXorf1O96002 111 aa10.16□□□□□ -0.78
TUBE1-208ENST00000604743 P0DMU3 169 aa10.16□□□□□ -0.78
TUBE1-208ENST00000604743 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
TUBE1-208ENST00000604743 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
TUBE1-208ENST00000604743 MUC21Q5SSG8 566 aa10.16□□□□□ -0.78
TUBE1-208ENST00000604743 AKR1C8PQ5T2L2 129 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms