RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
SSBP4-213ENST00000602088 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
SSBP4-213ENST00000602088 TMEM78Q5T7P6 136 aa11.93□□□□□ -0.5
SSBP4-213ENST00000602088 RAB24Q969Q5 203 aa11.93□□□□□ -0.5
SSBP4-213ENST00000602088 VGLL1Q99990 258 aa11.93□□□□□ -0.5
SSBP4-213ENST00000602088 NIPSNAP3BQ9BS92 247 aa11.93□□□□□ -0.5
SSBP4-213ENST00000602088 PLA2G2EQ9NZK7 142 aa11.93□□□□□ -0.5
SSBP4-213ENST00000602088 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 PLAC8L1A1L4L8 177 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 IGLL5B9A064 214 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 J3KRW8 73 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 TAAR5O14804 337 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
SSBP4-213ENST00000602088 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 HTN1P15515 57 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 CSN1S1P47710 185 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 TCTAP57738 103 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 CYTL1Q9NRR1 136 aa11.92□□□□□ -0.5
SSBP4-213ENST00000602088 ALMS1Q8TCU4 4167 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 TRAV12-3A0A0B4J271 114 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 LYRM9A8MSI8 78 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 KLLNB2CW77 178 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 NMBP08949 121 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 CRISP2P16562 243 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 ZNF493Q6ZR52 646 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 RXFP4Q8TDU9 374 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 ZNF492Q9P255 531 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 APLNQ9ULZ1 77 aa11.91□□□□□ -0.5
SSBP4-213ENST00000602088 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
SSBP4-213ENST00000602088 PGPA6NDG6 321 aa11.9□□□□□ -0.5
SSBP4-213ENST00000602088 HMSDA8MTL9 139 aa11.9□□□□□ -0.5
SSBP4-213ENST00000602088 ZNF138P52744 262 aa11.9□□□□□ -0.5
SSBP4-213ENST00000602088 OR11H4Q8NGC9 324 aa11.9□□□□□ -0.5
SSBP4-213ENST00000602088 C16orf74Q96GX8 76 aa11.9□□□□□ -0.5
SSBP4-213ENST00000602088 ACTR3CQ9C0K3 210 aaPredicted RBP11.9□□□□□ -0.5
SSBP4-213ENST00000602088 C7orf71A4D174 169 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 DIRC3C9JPN6 131 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 ZNF324O75467 553 aaPredicted RBP11.89□□□□□ -0.51
SSBP4-213ENST00000602088 LY6G6CO95867 125 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 GPX1P07203 203 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 DAD1P61803 113 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 CD300CQ08708 224 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 ZNF345Q14585 488 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 FAM74A1Q5RGS3 127 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 KCNRGQ8N5I3 272 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 ZFAND2AQ8N6M9 145 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 ARL6IP6Q8N6S5 226 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 SUN5Q8TC36 379 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
SSBP4-213ENST00000602088 TMEM263Q8WUH6 116 aaKnown RBP11.89□□□□□ -0.51
SSBP4-213ENST00000602088 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
SSBP4-213ENST00000602088 IGHV4-4A0A075B6R2 117 aa11.88□□□□□ -0.51
SSBP4-213ENST00000602088 TRBV7-9A0A0J9YWB2 115 aa11.88□□□□□ -0.51
SSBP4-213ENST00000602088 GCHFRP30047 84 aa11.88□□□□□ -0.51
SSBP4-213ENST00000602088 RNASE4P34096 147 aaKnown RBP11.88□□□□□ -0.51
SSBP4-213ENST00000602088 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
SSBP4-213ENST00000602088 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
SSBP4-213ENST00000602088 CCDC28AQ8IWP9 274 aa11.88□□□□□ -0.51
SSBP4-213ENST00000602088 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
SSBP4-213ENST00000602088 TIMM8BQ9Y5J9 83 aaPredicted RBP11.88□□□□□ -0.51
SSBP4-213ENST00000602088 CXorf1O96002 111 aa11.87□□□□□ -0.51
SSBP4-213ENST00000602088 PRR9Q5T870 116 aa11.87□□□□□ -0.51
SSBP4-213ENST00000602088 LGALS9CQ6DKI2 356 aa11.87□□□□□ -0.51
SSBP4-213ENST00000602088 Q8TAT8 98 aa11.87□□□□□ -0.51
SSBP4-213ENST00000602088 CMTM2Q8TAZ6 248 aa11.87□□□□□ -0.51
SSBP4-213ENST00000602088 ARPC5LQ9BPX5 153 aa11.87□□□□□ -0.51
SSBP4-213ENST00000602088 HYDINQ4G0P3 5121 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 DEFB130BP0DP73 79 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 DEFB130AP0DP74 79 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 ZNF726P1Q15940 193 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 TMED6Q8WW62 240 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 TMEM167BQ9NRX6 74 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 LENEPQ9Y5L5 61 aa11.86□□□□□ -0.51
SSBP4-213ENST00000602088 A0A0D9SG52 128 aa11.85□□□□□ -0.51
SSBP4-213ENST00000602088 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
SSBP4-213ENST00000602088 Q6ZNX1 250 aa11.85□□□□□ -0.51
SSBP4-213ENST00000602088 ST6GAL2Q96JF0 529 aa11.85□□□□□ -0.51
SSBP4-213ENST00000602088 FAM210BQ96KR6 192 aa11.85□□□□□ -0.51
SSBP4-213ENST00000602088 NOP10Q9NPE3 64 aaKnown RBP11.85□□□□□ -0.51
SSBP4-213ENST00000602088 RPH3ALQ9UNE2 315 aa11.85□□□□□ -0.51
SSBP4-213ENST00000602088 HTN3P15516 51 aa11.84□□□□□ -0.51
SSBP4-213ENST00000602088 AKR1C8PQ5T2L2 129 aa11.84□□□□□ -0.51
SSBP4-213ENST00000602088 Q6ZQT7 251 aa11.84□□□□□ -0.51
SSBP4-213ENST00000602088 GOLT1AQ6ZVE7 132 aa11.84□□□□□ -0.51
SSBP4-213ENST00000602088 EIF4E3Q8N5X7 224 aaKnown RBP11.84□□□□□ -0.51
SSBP4-213ENST00000602088 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
SSBP4-213ENST00000602088 CBY3A6NI87 242 aa11.83□□□□□ -0.52
SSBP4-213ENST00000602088 GNG5P63218 68 aa11.83□□□□□ -0.52
SSBP4-213ENST00000602088 ANXA2RQ3ZCQ2 193 aa11.83□□□□□ -0.52
SSBP4-213ENST00000602088 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
SSBP4-213ENST00000602088 VPS13DQ5THJ4 4388 aa11.83□□□□□ -0.52
SSBP4-213ENST00000602088 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
SSBP4-213ENST00000602088 BCL2L11O43521 198 aa11.82□□□□□ -0.52
SSBP4-213ENST00000602088 SUMO1P63165 101 aaKnown RBP11.82□□□□□ -0.52
SSBP4-213ENST00000602088 IQCF2Q8IXL9 164 aa11.82□□□□□ -0.52
SSBP4-213ENST00000602088 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms