RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 NOP10Q9NPE3 64 aaKnown RBP11.9□□□□□ -0.5
NOTCH3-205ENST00000600841 IGKV2-40A0A087WW87 121 aaPredicted RBP11.89□□□□□ -0.51
NOTCH3-205ENST00000600841 IGKV2D-40P01614 121 aaPredicted RBP11.89□□□□□ -0.51
NOTCH3-205ENST00000600841 UBE2L3P68036 154 aaKnown RBP11.89□□□□□ -0.51
NOTCH3-205ENST00000600841 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
NOTCH3-205ENST00000600841 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
NOTCH3-205ENST00000600841 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
NOTCH3-205ENST00000600841 C7orf71A4D174 169 aa11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 CBY3A6NI87 242 aa11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 ATP5G1P05496 136 aa11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 GIPP09681 153 aaPredicted RBP11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 ATP5G3P48201 142 aa11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 ZNF503Q96F45 646 aa11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 FAM19A4Q96LR4 140 aa11.88□□□□□ -0.51
NOTCH3-205ENST00000600841 SNURFLB1AK76 121 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 KLLNB2CW77 178 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 F5H768 121 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 M6PRP20645 277 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 CSN1S1P47710 185 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 RANP62826 216 aaKnown RBP11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 ZNF266Q14584 549 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 LYPD1Q8N2G4 141 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 C15orf53Q8NAA6 179 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 ASB13Q8WXK3 278 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 VGLL1Q99990 258 aa11.87□□□□□ -0.51
NOTCH3-205ENST00000600841 GPX1P07203 203 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 NMBP08949 121 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 CRISP2P16562 243 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 RNASE4P34096 147 aaKnown RBP11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 CD300CQ08708 224 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 BTN1A1Q13410 526 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 AQP10Q96PS8 301 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 Q9H3A6 140 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 ZNF492Q9P255 531 aa11.86□□□□□ -0.51
NOTCH3-205ENST00000600841 A0A1W2PPV4 95 aa11.85□□□□□ -0.51
NOTCH3-205ENST00000600841 ZNF324O75467 553 aaPredicted RBP11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 EIF3GO75821 320 aaKnown RBP eCLIP11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 ZNF138P52744 262 aa11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 RAB2AP61019 212 aa11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 ZFAND2AQ8N6M9 145 aa11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 LINC00612Q8N6U2 182 aa11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 ZNF680Q8NEM1 530 aa11.84□□□□□ -0.51
NOTCH3-205ENST00000600841 RBAKDNA6NC62 111 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 DAZ2Q13117 558 aaKnown RBP11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 RNF212Q495C1 297 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 Q5BKY6 102 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 HSD17B11Q8NBQ5 300 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 INO80EQ8NBZ0 244 aaPredicted RBP11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 OR10G4Q8NGN3 311 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 OR10G9Q8NGN4 311 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 OR10G7Q8NGN6 311 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 OR2T35Q8NGX2 323 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 Q8TAT8 98 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 RXFP4Q8TDU9 374 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 LINC00467Q9BRT7 94 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 OTORQ9NRC9 128 aa11.83□□□□□ -0.52
NOTCH3-205ENST00000600841 FXYD6-FXYD2A0A087WZ82 144 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 TRBV7-9A0A0J9YWB2 115 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 GAGE7O76087 117 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 GAGE12FP0CL80 117 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 GAGE12GP0CL81 117 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 GAGE12IP0CL82 117 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 ANXA2RQ3ZCQ2 193 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 OR2G3Q8NGZ4 309 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 HYLS1Q96M11 299 aa11.82□□□□□ -0.52
NOTCH3-205ENST00000600841 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 RGS13O14921 159 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 NUDT3O95989 172 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 PRR9Q5T870 116 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 CMTM2Q8TAZ6 248 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 ATG101Q9BSB4 218 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 GSN-AS1Q9NRJ2 163 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 NACAE9PAV3 2078 aa11.81□□□□□ -0.52
NOTCH3-205ENST00000600841 PGPA6NDG6 321 aa11.8□□□□□ -0.52
NOTCH3-205ENST00000600841 M0R2N4 97 aa11.8□□□□□ -0.52
NOTCH3-205ENST00000600841 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
NOTCH3-205ENST00000600841 ATP6V0CP27449 155 aa11.8□□□□□ -0.52
NOTCH3-205ENST00000600841 CDC34P49427 236 aaPredicted RBP11.8□□□□□ -0.52
NOTCH3-205ENST00000600841 C11orf72Q8NBR9 251 aa11.8□□□□□ -0.52
NOTCH3-205ENST00000600841 HECTD4Q9Y4D8 3996 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 DNAH2Q9P225 4427 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 IGLV2-18A0A075B6J9 118 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 IGHV1OR15-1A0A075B7D0 117 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 MBP02144 154 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 ARL14EPLP0DKL9 152 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 FAM3BP58499 235 aaPredicted RBP11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 SERF2P84101 59 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 OR5I1Q13606 314 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 Q6ZTI0 123 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 RPH3ALQ9UNE2 315 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
NOTCH3-205ENST00000600841 LGALS9BQ3B8N2 356 aa11.78□□□□□ -0.52
NOTCH3-205ENST00000600841 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms