RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PEX7O00628 323 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 SPINK13Q1W4C9 94 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 Q8TAT8 98 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 LINC00477Q96M19 166 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 ATG101Q9BSB4 218 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 RETNQ9HD89 108 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 XCL2Q9UBD3 114 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 LOC102723971A0A1B0GUV8 181 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 C11orf94C9JXX5 98 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 UBE2CO00762 179 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 BCL2P10415 239 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 KIR3DS1Q14943 382 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 FAM19A4Q96LR4 140 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 LINC00479Q96M42 142 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 PPP1R14DQ9NXH3 145 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 ZNF492Q9P255 531 aa14.61□□□□□ -0.07
SHKBP1-222ENST00000600320 CRXO43186 299 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 IFNA1P01562 189 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 IGLV2-11P01706 119 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 ZNF138P52744 262 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 NUTF2P61970 127 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 DEFB135Q30KP9 77 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 TMEM78Q5T7P6 136 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 CYB561D1Q8N8Q1 229 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 ODF3Q96PU9 254 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 TM2D3Q9BRN9 247 aa14.6□□□□□ -0.07
SHKBP1-222ENST00000600320 TRAV12-2A0A075B6T6 113 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 TRAV34A0A0B4J273 112 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 SERTM2A0A1B0GWG4 89 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 SCO2A0A1W2PP80 73 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 ZNF767PQ75MW2 155 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 CSNK1G2-AS1Q8NCQ2 148 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 HIST1H2BAQ96A08 127 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 TVP23CQ96ET8 276 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 RARRES2Q99969 163 aa14.59□□□□□ -0.07
SHKBP1-222ENST00000600320 J3KRW8 73 aa14.58□□□□□ -0.08
SHKBP1-222ENST00000600320 Q6ZWC4 215 aa14.58□□□□□ -0.08
SHKBP1-222ENST00000600320 VAX2Q9UIW0 290 aa14.58□□□□□ -0.08
SHKBP1-222ENST00000600320 PSG8Q9UQ74 426 aa14.58□□□□□ -0.08
SHKBP1-222ENST00000600320 PRKDCP78527 4128 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-222ENST00000600320 LEPP41159 167 aa14.57□□□□□ -0.08
SHKBP1-222ENST00000600320 CDKN1BP46527 198 aa14.57□□□□□ -0.08
SHKBP1-222ENST00000600320 MEF2BQ02080 365 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-222ENST00000600320 ZFAND2AQ8N6M9 145 aa14.57□□□□□ -0.08
SHKBP1-222ENST00000600320 TMEM75Q8N9X5 138 aa14.57□□□□□ -0.08
SHKBP1-222ENST00000600320 TCEAL7Q9BRU2 100 aa14.57□□□□□ -0.08
SHKBP1-222ENST00000600320 DNAH9Q9NYC9 4486 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 RBFOX3A6NFN3 312 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 F6UZH7 168 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 K7EQM0 130 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 AMBPP02760 352 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 RBMY1A1P0DJD3 496 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 RBMY1CP0DJD4 496 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 CRISP2P16562 243 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 AKR1C3P42330 323 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 FLI1Q01543 452 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 RBMY1FQ15415 496 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 TOR2AQ5JU69 321 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 ZNF506Q5JVG8 444 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 PRR9Q5T870 116 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 C2CD4CQ8TF44 421 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 C11orf52Q96A22 123 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 RNF183Q96D59 192 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 IGF2BP2-AS1Q96M15 143 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 TXNDC17Q9BRA2 123 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 OVOL2Q9BRP0 275 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 C1QTNF4Q9BXJ3 329 aa14.56□□□□□ -0.08
SHKBP1-222ENST00000600320 KLLNB2CW77 178 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 TSPOP30536 169 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 TAGLN2P37802 199 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 GFI1BQ5VTD9 330 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 PRNTQ86SH4 94 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 C1orf158Q8N1D5 194 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 FAM210AQ96ND0 272 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 RCHY1Q96PM5 261 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 SPATA25Q9BR10 227 aa14.55□□□□□ -0.08
SHKBP1-222ENST00000600320 SPRY2O43597 315 aa14.54□□□□□ -0.08
SHKBP1-222ENST00000600320 BTN1A1Q13410 526 aa14.54□□□□□ -0.08
SHKBP1-222ENST00000600320 CLLU1Q5K131 121 aa14.54□□□□□ -0.08
SHKBP1-222ENST00000600320 KLF12Q9Y4X4 402 aa14.54□□□□□ -0.08
SHKBP1-222ENST00000600320 TRBV7-9A0A0J9YWB2 115 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 INSP01308 110 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 RAB14P61106 215 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 TMEM183BQ1AE95 376 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 Q86TA4 180 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 C8orf49Q96NF6 230 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 TP53TG1Q9Y2A0 90 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 LENEPQ9Y5L5 61 aa14.53□□□□□ -0.08
SHKBP1-222ENST00000600320 Q6ZQT7 251 aa14.52□□□□□ -0.09
SHKBP1-222ENST00000600320 DERL1Q9BUN8 251 aa14.52□□□□□ -0.09
SHKBP1-222ENST00000600320 TREM1Q9NP99 234 aa14.52□□□□□ -0.09
SHKBP1-222ENST00000600320 HUWE1Q7Z6Z7 4374 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 TRAV12-3A0A0B4J271 114 aa14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 TRBV6-1A0A0K0K1D8 114 aa14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 C7orf71A4D174 169 aa14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 FBLL1A6NHQ2 334 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 PDE6DO43924 150 aa14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 NHLRC4P0CG21 123 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 RNASE4P34096 147 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 ZNF705AQ6ZN79 300 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms