RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, human

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-211	ENST00000599642	HIST1H1A	Q02539	215 aa	Predicted RBP	13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	GOLT1A	Q6ZVE7	132 aa		13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	DEFB125	Q8N687	156 aa		13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	NDFIP1	Q9BT67	221 aa		13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	AGPAT4-IT1	Q9H0P7	198 aa		13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	TUBA4B	Q9H853	241 aa		13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	SRD5A3	Q9H8P0	318 aa		13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.71	□□□□□ -0.21
KHSRP-211	ENST00000599642	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	PRAC2	D3DTV9	90 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	UBE2C	O00762	179 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	CRISP2	P16562	243 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	LEP	P41159	167 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	APOC4	P55056	127 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	GNG5	P63218	68 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	FLI1	Q01543	452 aa	Predicted RBP	13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	FAM74A3	Q4VXF1	159 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	GDF5OS	Q5U4N7	250 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	FAM19A4	Q96LR4	140 aa		13.7	□□□□□ -0.22
KHSRP-211	ENST00000599642	AGRN	O00468	2067 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	SCO2	A0A1W2PP80	73 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	KNCN	A6PVL3	124 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642		F6UB75	175 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	IGKV2D-40	P01614	121 aa	Predicted RBP	13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	IGLV2-11	P01706	119 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	IGHV4-30-4	P0DP06	118 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	NDUFA5	Q16718	116 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	AMTN	Q6UX39	209 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	COX8C	Q7Z4L0	72 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	OR4B1	Q8NGF8	309 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	CITED4	Q96RK1	184 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	C20orf144	Q9BQM9	153 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	PSG8	Q9UQ74	426 aa		13.69	□□□□□ -0.22
KHSRP-211	ENST00000599642	SRP19	P09132	144 aa	Known RBP	13.68	□□□□□ -0.22
KHSRP-211	ENST00000599642	CDKN1B	P46527	198 aa		13.68	□□□□□ -0.22
KHSRP-211	ENST00000599642	VGLL1	Q99990	258 aa		13.68	□□□□□ -0.22
KHSRP-211	ENST00000599642	SLC35B3	Q9H1N7	401 aa		13.68	□□□□□ -0.22
KHSRP-211	ENST00000599642	RPH3AL	Q9UNE2	315 aa		13.68	□□□□□ -0.22
KHSRP-211	ENST00000599642	CMYA5	Q8N3K9	4069 aa		13.68	□□□□□ -0.22
KHSRP-211	ENST00000599642		C9JCJ5	164 aa		13.67	□□□□□ -0.22
KHSRP-211	ENST00000599642	LTA	P01374	205 aa		13.67	□□□□□ -0.22
KHSRP-211	ENST00000599642	BIN3	Q9NQY0	253 aa		13.67	□□□□□ -0.22
KHSRP-211	ENST00000599642	LY96	Q9Y6Y9	160 aa		13.67	□□□□□ -0.22
KHSRP-211	ENST00000599642	MGAM2	Q2M2H8	2515 aa		13.66	□□□□□ -0.22
KHSRP-211	ENST00000599642	CT45A10	P0DMU9	189 aa		13.66	□□□□□ -0.22
KHSRP-211	ENST00000599642	RPL35	P42766	123 aa	Known RBP	13.66	□□□□□ -0.22
KHSRP-211	ENST00000599642	ZNF124	Q15973	351 aa		13.66	□□□□□ -0.22
KHSRP-211	ENST00000599642	CSTL1	Q9H114	145 aa		13.66	□□□□□ -0.22
KHSRP-211	ENST00000599642	WFDC10A	Q9H1F0	79 aa		13.66	□□□□□ -0.22
KHSRP-211	ENST00000599642	KLLN	B2CW77	178 aa		13.65	□□□□□ -0.22
KHSRP-211	ENST00000599642		Q86TA4	180 aa		13.65	□□□□□ -0.22
KHSRP-211	ENST00000599642	TMEM183A	Q8IXX5	376 aa		13.65	□□□□□ -0.22
KHSRP-211	ENST00000599642		K7EIL1	84 aa		13.64	□□□□□ -0.23
KHSRP-211	ENST00000599642	ERCC8	Q13216	396 aa		13.64	□□□□□ -0.23
KHSRP-211	ENST00000599642	COMMD7	Q86VX2	200 aa		13.64	□□□□□ -0.23
KHSRP-211	ENST00000599642	PARL	Q9H300	379 aa		13.64	□□□□□ -0.23
KHSRP-211	ENST00000599642	TREM1	Q9NP99	234 aa		13.64	□□□□□ -0.23
KHSRP-211	ENST00000599642	TRAV8-1	A0A0A6YYK1	113 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	RBMY1B	A6NDE4	496 aa	Known RBP	13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	RBMY1E	A6NEQ0	496 aa	Known RBP	13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	RBMY1D	P0C7P1	496 aa	Known RBP	13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	ZNF705D	P0CH99	300 aa	Predicted RBP	13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	ZNF705B	P0CI00	300 aa	Predicted RBP	13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	DEFB1	P60022	68 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	SMUG1	Q53HV7	270 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642		Q6ZWC4	215 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	PRNT	Q86SH4	94 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	BAGE2	Q86Y30	109 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	TMEM256	Q8N2U0	113 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	MLST8	Q9BVC4	326 aa		13.63	□□□□□ -0.23
KHSRP-211	ENST00000599642	DNHD1	Q96M86	4753 aa		13.62	□□□□□ -0.23
KHSRP-211	ENST00000599642	GNG4	P50150	75 aa		13.62	□□□□□ -0.23
KHSRP-211	ENST00000599642	SOHLH1	Q5JUK2	328 aa		13.62	□□□□□ -0.23
KHSRP-211	ENST00000599642	ZFAND2A	Q8N6M9	145 aa		13.62	□□□□□ -0.23
KHSRP-211	ENST00000599642	IGF2BP2-AS1	Q96M15	143 aa		13.62	□□□□□ -0.23
KHSRP-211	ENST00000599642	LINC00479	Q96M42	142 aa		13.62	□□□□□ -0.23
KHSRP-211	ENST00000599642	ASCL2	Q99929	193 aa		13.62	□□□□□ -0.23
KHSRP-211	ENST00000599642	TRAV34	A0A0B4J273	112 aa		13.61	□□□□□ -0.23
KHSRP-211	ENST00000599642	GPX1	P07203	203 aa		13.61	□□□□□ -0.23
KHSRP-211	ENST00000599642		Q6AWC8	147 aa		13.61	□□□□□ -0.23
KHSRP-211	ENST00000599642	SMIM7	Q9BQ49	75 aa		13.61	□□□□□ -0.23
KHSRP-211	ENST00000599642	TP53TG1	Q9Y2A0	90 aa		13.61	□□□□□ -0.23
KHSRP-211	ENST00000599642	ZNF727	A8MUV8	499 aa		13.6	□□□□□ -0.23
KHSRP-211	ENST00000599642	INS	P01308	110 aa		13.6	□□□□□ -0.23
KHSRP-211	ENST00000599642	FRMD6-AS1	P0C7T7	363 aa		13.6	□□□□□ -0.23
KHSRP-211	ENST00000599642	RPL35A	P18077	110 aa	Known RBP	13.6	□□□□□ -0.23
KHSRP-211	ENST00000599642	SRSF3	P84103	164 aa	Known RBP	13.6	□□□□□ -0.23
KHSRP-211	ENST00000599642		Q8TAT8	98 aa		13.6	□□□□□ -0.23
KHSRP-211	ENST00000599642	DERL1	Q9BUN8	251 aa		13.6	□□□□□ -0.23
KHSRP-211	ENST00000599642	C7orf71	A4D174	169 aa		13.59	□□□□□ -0.23
KHSRP-211	ENST00000599642	CRX	O43186	299 aa	Predicted RBP	13.59	□□□□□ -0.23
KHSRP-211	ENST00000599642	IGKV3-20	P01619	116 aa		13.59	□□□□□ -0.23
KHSRP-211	ENST00000599642	SPINK13	Q1W4C9	94 aa		13.59	□□□□□ -0.23
KHSRP-211	ENST00000599642	CENPW	Q5EE01	88 aa		13.59	□□□□□ -0.23
KHSRP-211	ENST00000599642	TVP23C	Q96ET8	276 aa		13.59	□□□□□ -0.23
KHSRP-211	ENST00000599642	NBEAL1	Q6ZS30	2694 aa		13.59	□□□□□ -0.23
KHSRP-211	ENST00000599642	TRAV21	A0A0B4J279	112 aa		13.58	□□□□□ -0.24
KHSRP-211	ENST00000599642	TMEM218	A2RU14	115 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms