RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 RXFP4Q8TDU9 374 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 PYGO2Q9BRQ0 406 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 DNAH10Q8IVF4 4471 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 BORCS7-ASMTA0A0B4J1R7 106 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 TRAV12-3A0A0B4J271 114 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 PQLC2Q6ZP29 291 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 UBE2DNLQ8IWF7 75 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 OR10G4Q8NGN3 311 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 OR10G9Q8NGN4 311 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 OR10G7Q8NGN6 311 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 FXYD5Q96DB9 178 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
LIG1-218ENST00000599322 FXYD6-FXYD2A0A087WZ82 144 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 C7orf71A4D174 169 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 ATP5G1P05496 136 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 NMBP08949 121 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 AZU1P20160 251 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 ATP5G3P48201 142 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 ERCC8Q13216 396 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 PLA2G2EQ9NZK7 142 aa10.07□□□□□ -0.8
LIG1-218ENST00000599322 CBY3A6NI87 242 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 F5H768 121 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 RNASE4P34096 147 aaKnown RBP10.06□□□□□ -0.8
LIG1-218ENST00000599322 ZNF138P52744 262 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 SERF2P84101 59 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 C15orf53Q8NAA6 179 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 HSD17B11Q8NBQ5 300 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 ZNF680Q8NEM1 530 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 GNPNAT1Q96EK6 184 aaPredicted RBP10.06□□□□□ -0.8
LIG1-218ENST00000599322 PSMG3Q9BT73 122 aaPredicted RBP10.06□□□□□ -0.8
LIG1-218ENST00000599322 Q9H3A6 140 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 WFDC1Q9HC57 220 aa10.06□□□□□ -0.8
LIG1-218ENST00000599322 NOP10Q9NPE3 64 aaKnown RBP10.06□□□□□ -0.8
LIG1-218ENST00000599322 IGKV2-40A0A087WW87 121 aaPredicted RBP10.05□□□□□ -0.8
LIG1-218ENST00000599322 RBAKDNA6NC62 111 aa10.05□□□□□ -0.8
LIG1-218ENST00000599322 RGS13O14921 159 aa10.05□□□□□ -0.8
LIG1-218ENST00000599322 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
LIG1-218ENST00000599322 PRM2P04554 102 aa10.05□□□□□ -0.8
LIG1-218ENST00000599322 OR2T35Q8NGX2 323 aa10.05□□□□□ -0.8
LIG1-218ENST00000599322 PHYHIPLQ96FC7 376 aa10.05□□□□□ -0.8
LIG1-218ENST00000599322 HYLS1Q96M11 299 aa10.05□□□□□ -0.8
LIG1-218ENST00000599322 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
LIG1-218ENST00000599322 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
LIG1-218ENST00000599322 PGPA6NDG6 321 aa10.04□□□□□ -0.8
LIG1-218ENST00000599322 CDC34P49427 236 aaPredicted RBP10.04□□□□□ -0.8
LIG1-218ENST00000599322 EIF4E3Q8N5X7 224 aaKnown RBP10.04□□□□□ -0.8
LIG1-218ENST00000599322 POM121L12Q8N7R1 296 aa10.04□□□□□ -0.8
LIG1-218ENST00000599322 RNASE8Q8TDE3 154 aaKnown RBP10.04□□□□□ -0.8
LIG1-218ENST00000599322 ARPC5LQ9BPX5 153 aa10.04□□□□□ -0.8
LIG1-218ENST00000599322 KRTAP17-1Q9BYP8 105 aa10.04□□□□□ -0.8
LIG1-218ENST00000599322 ACTR3CQ9C0K3 210 aaPredicted RBP10.04□□□□□ -0.8
LIG1-218ENST00000599322 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
LIG1-218ENST00000599322 VPS13DQ5THJ4 4388 aa10.04□□□□□ -0.8
LIG1-218ENST00000599322 CRISP2P16562 243 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 ATP6V0CP27449 155 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 RAB2AP61019 212 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 KIR3DS1Q14943 382 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 TMEM88Q6PEY1 159 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 ARL6IP6Q8N6S5 226 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 OR2G3Q8NGZ4 309 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 VGLL1Q99990 258 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
LIG1-218ENST00000599322 HERC2O95714 4834 aa10.02□□□□□ -0.8
LIG1-218ENST00000599322 KLLNB2CW77 178 aa10.02□□□□□ -0.81
LIG1-218ENST00000599322 K7EQM0 130 aa10.02□□□□□ -0.81
LIG1-218ENST00000599322 TAAR5O14804 337 aa10.02□□□□□ -0.81
LIG1-218ENST00000599322 BTN1A1Q13410 526 aa10.02□□□□□ -0.81
LIG1-218ENST00000599322 TNFSF18Q9UNG2 199 aa10.02□□□□□ -0.81
LIG1-218ENST00000599322 LENEPQ9Y5L5 61 aa10.02□□□□□ -0.81
LIG1-218ENST00000599322 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 HMGB3O15347 200 aaKnown RBP10.01□□□□□ -0.81
LIG1-218ENST00000599322 GAGE7O76087 117 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 CXorf1O96002 111 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 GAGE12FP0CL80 117 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 GAGE12GP0CL81 117 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 GAGE12IP0CL82 117 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 CD300CQ08708 224 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 OR5I1Q13606 314 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 RNF212Q495C1 297 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 IQCF2Q8IXL9 164 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 ZNF503Q96F45 646 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 FAM19A4Q96LR4 140 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 NDFIP1Q9BT67 221 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 TMEM167BQ9NRX6 74 aa10.01□□□□□ -0.81
LIG1-218ENST00000599322 TRGV2A0A075B6R0 118 aa10□□□□□ -0.81
LIG1-218ENST00000599322 IGHV1OR15-1A0A075B7D0 117 aa10□□□□□ -0.81
LIG1-218ENST00000599322 SERTM2A0A1B0GWG4 89 aa10□□□□□ -0.81
LIG1-218ENST00000599322 PLAC8L1A1L4L8 177 aa10□□□□□ -0.81
LIG1-218ENST00000599322 NUDT3O95989 172 aa10□□□□□ -0.81
LIG1-218ENST00000599322 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
LIG1-218ENST00000599322 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
LIG1-218ENST00000599322 ANXA2RQ3ZCQ2 193 aa10□□□□□ -0.81
LIG1-218ENST00000599322 AKR1C8PQ5T2L2 129 aa10□□□□□ -0.81
LIG1-218ENST00000599322 TMED6Q8WW62 240 aa10□□□□□ -0.81
LIG1-218ENST00000599322 RAB24Q969Q5 203 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms