RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 F6UB75 175 aa17.48■□□□□ 0.39
SYMPK-212ENST00000598896 ID1P41134 155 aa17.48■□□□□ 0.39
SYMPK-212ENST00000598896 IZUMO1RA6ND01 250 aa17.47■□□□□ 0.39
SYMPK-212ENST00000598896 GPR61Q9BZJ8 451 aa17.47■□□□□ 0.39
SYMPK-212ENST00000598896 AGPAT4-IT1Q9H0P7 198 aa17.47■□□□□ 0.39
SYMPK-212ENST00000598896 RNASE7Q9H1E1 156 aaKnown RBP17.47■□□□□ 0.39
SYMPK-212ENST00000598896 ZFP30Q9Y2G7 519 aa17.47■□□□□ 0.39
SYMPK-212ENST00000598896 MT-ND4LP03901 98 aa17.46■□□□□ 0.39
SYMPK-212ENST00000598896 PAFAH1B2P68402 229 aa17.46■□□□□ 0.39
SYMPK-212ENST00000598896 PRR27Q6MZM9 219 aa17.46■□□□□ 0.39
SYMPK-212ENST00000598896 C8orf49Q96NF6 230 aa17.46■□□□□ 0.39
SYMPK-212ENST00000598896 VWFP04275 2813 aa17.46■□□□□ 0.39
SYMPK-212ENST00000598896 SAP30O75446 220 aa17.46■□□□□ 0.38
SYMPK-212ENST00000598896 PSMG4Q5JS54 123 aa17.46■□□□□ 0.38
SYMPK-212ENST00000598896 LINC00322Q6ZN03 302 aaPredicted RBP17.46■□□□□ 0.38
SYMPK-212ENST00000598896 SPATA3Q8NHX4 192 aa17.46■□□□□ 0.38
SYMPK-212ENST00000598896 C9orf47Q6ZRZ4 202 aa17.45■□□□□ 0.38
SYMPK-212ENST00000598896 ZC2HC1AQ96GY0 325 aa17.45■□□□□ 0.38
SYMPK-212ENST00000598896 PRR25Q96S07 402 aa17.45■□□□□ 0.38
SYMPK-212ENST00000598896 TMEM242Q9NWH2 141 aa17.45■□□□□ 0.38
SYMPK-212ENST00000598896 FBLL1A6NHQ2 334 aaKnown RBP17.44■□□□□ 0.38
SYMPK-212ENST00000598896 ERVFC1-1P60608 527 aa17.44■□□□□ 0.38
SYMPK-212ENST00000598896 SNRPD3P62318 126 aaKnown RBP17.44■□□□□ 0.38
SYMPK-212ENST00000598896 SMCO4Q9NRQ5 59 aa17.44■□□□□ 0.38
SYMPK-212ENST00000598896 ANAPC16Q96DE5 110 aa17.44■□□□□ 0.38
SYMPK-212ENST00000598896 CTDSP1Q9GZU7 261 aa17.44■□□□□ 0.38
SYMPK-212ENST00000598896 TRAV2A0A0B4J234 112 aa17.43■□□□□ 0.38
SYMPK-212ENST00000598896 GDF5OSQ5U4N7 250 aa17.43■□□□□ 0.38
SYMPK-212ENST00000598896 OR8A1Q8NGG7 326 aa17.43■□□□□ 0.38
SYMPK-212ENST00000598896 OR10G8Q8NGN5 311 aa17.43■□□□□ 0.38
SYMPK-212ENST00000598896 SORL1Q92673 2214 aa17.42■□□□□ 0.38
SYMPK-212ENST00000598896 H7BYZ3 331 aa17.42■□□□□ 0.38
SYMPK-212ENST00000598896 IBA57Q5T440 356 aaKnown RBP17.42■□□□□ 0.38
SYMPK-212ENST00000598896 TMEM78Q5T7P6 136 aa17.42■□□□□ 0.38
SYMPK-212ENST00000598896 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.42■□□□□ 0.38
SYMPK-212ENST00000598896 SPAG8Q99932 426 aaPredicted RBP17.42■□□□□ 0.38
SYMPK-212ENST00000598896 ZNF256Q9Y2P7 627 aaPredicted RBP17.42■□□□□ 0.38
SYMPK-212ENST00000598896 NPIPB6E9PJ23 425 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 HIST1H1AQ02539 215 aaPredicted RBP17.41■□□□□ 0.38
SYMPK-212ENST00000598896 OR10J6PQ8NGY7 276 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 ZNF492Q9P255 531 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 TRAV25A0A0B4J276 109 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 IGLV1-51P01701 117 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 ZNF138P52744 262 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 SAPCD1Q5SSQ6 148 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 OSTCQ9NRP0 149 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 V9GYV3 84 aa17.41■□□□□ 0.38
SYMPK-212ENST00000598896 CRIP1P50238 77 aa17.4■□□□□ 0.38
SYMPK-212ENST00000598896 COX8CQ7Z4L0 72 aa17.4■□□□□ 0.38
SYMPK-212ENST00000598896 TUBA4BQ9H853 241 aa17.4■□□□□ 0.38
SYMPK-212ENST00000598896 URGCP-MRPS24S4R325 110 aa17.4■□□□□ 0.38
SYMPK-212ENST00000598896 C19orf71A6NCJ1 209 aa17.39■□□□□ 0.38
SYMPK-212ENST00000598896 PPP1R2P9O14990 202 aa17.39■□□□□ 0.38
SYMPK-212ENST00000598896 FAM231DQ6ZW35 169 aa17.39■□□□□ 0.38
SYMPK-212ENST00000598896 NUDT10Q8NFP7 164 aa17.39■□□□□ 0.38
SYMPK-212ENST00000598896 NUDT11Q96G61 164 aa17.39■□□□□ 0.38
SYMPK-212ENST00000598896 ZNF747Q9BV97 191 aa17.39■□□□□ 0.38
SYMPK-212ENST00000598896 CT45A10P0DMU9 189 aa17.39■□□□□ 0.37
SYMPK-212ENST00000598896 CD33P20138 364 aa17.39■□□□□ 0.37
SYMPK-212ENST00000598896 C15orf54Q8N8G6 183 aa17.39■□□□□ 0.37
SYMPK-212ENST00000598896 YPEL4Q96NS1 127 aa17.39■□□□□ 0.37
SYMPK-212ENST00000598896 PPP1R14DQ9NXH3 145 aa17.39■□□□□ 0.37
SYMPK-212ENST00000598896 CXorf65A6NEN9 183 aa17.38■□□□□ 0.37
SYMPK-212ENST00000598896 ZNF80P51504 273 aaPredicted RBP17.38■□□□□ 0.37
SYMPK-212ENST00000598896 OR4C46A6NHA9 309 aa17.37■□□□□ 0.37
SYMPK-212ENST00000598896 DEFB131AP59861 70 aa17.37■□□□□ 0.37
SYMPK-212ENST00000598896 LINC00477Q96M19 166 aa17.37■□□□□ 0.37
SYMPK-212ENST00000598896 NDFIP1Q9BT67 221 aa17.37■□□□□ 0.37
SYMPK-212ENST00000598896 TRRAPQ9Y4A5 3859 aa17.37■□□□□ 0.37
SYMPK-212ENST00000598896 CA1P00915 261 aaPredicted RBP17.37■□□□□ 0.37
SYMPK-212ENST00000598896 BIN3Q9NQY0 253 aa17.37■□□□□ 0.37
SYMPK-212ENST00000598896 A0A0J9YX75 114 aa17.36■□□□□ 0.37
SYMPK-212ENST00000598896 ELOBQ15370 118 aa17.36■□□□□ 0.37
SYMPK-212ENST00000598896 ZNF124Q15973 351 aa17.36■□□□□ 0.37
SYMPK-212ENST00000598896 MAP6D1Q9H9H5 199 aa17.36■□□□□ 0.37
SYMPK-212ENST00000598896 ZNF705GA8MUZ8 300 aaPredicted RBP17.35■□□□□ 0.37
SYMPK-212ENST00000598896 PFN1P07737 140 aaKnown RBP17.35■□□□□ 0.37
SYMPK-212ENST00000598896 C3orf56Q8N813 242 aa17.35■□□□□ 0.37
SYMPK-212ENST00000598896 FAM19A4Q96LR4 140 aa17.35■□□□□ 0.37
SYMPK-212ENST00000598896 SAV1Q9H4B6 383 aaPredicted RBP17.35■□□□□ 0.37
SYMPK-212ENST00000598896 AGRNO00468 2067 aa17.35■□□□□ 0.37
SYMPK-212ENST00000598896 COLCA2A8K830 154 aa17.35■□□□□ 0.37
SYMPK-212ENST00000598896 SMUG1Q53HV7 270 aa17.35■□□□□ 0.37
SYMPK-212ENST00000598896 ODF3L2Q3SX64 289 aa17.34■□□□□ 0.37
SYMPK-212ENST00000598896 PRR9Q5T870 116 aa17.34■□□□□ 0.37
SYMPK-212ENST00000598896 TMEM158Q8WZ71 300 aa17.34■□□□□ 0.37
SYMPK-212ENST00000598896 LENEPQ9Y5L5 61 aa17.34■□□□□ 0.37
SYMPK-212ENST00000598896 STAB1Q9NY15 2570 aa17.33■□□□□ 0.37
SYMPK-212ENST00000598896 GATCO43716 136 aaKnown RBP17.33■□□□□ 0.37
SYMPK-212ENST00000598896 P01737 135 aa17.33■□□□□ 0.37
SYMPK-212ENST00000598896 FOXI2Q6ZQN5 318 aa17.33■□□□□ 0.37
SYMPK-212ENST00000598896 ZFAND2AQ8N6M9 145 aa17.33■□□□□ 0.37
SYMPK-212ENST00000598896 DAZAP1Q96EP5 407 aaKnown RBP17.33■□□□□ 0.37
SYMPK-212ENST00000598896 KNCNA6PVL3 124 aa17.33■□□□□ 0.36
SYMPK-212ENST00000598896 SH2D1AO60880 128 aa17.33■□□□□ 0.36
SYMPK-212ENST00000598896 FAM3BP58499 235 aaPredicted RBP17.33■□□□□ 0.36
SYMPK-212ENST00000598896 FAM162BQ5T6X4 162 aa17.33■□□□□ 0.36
SYMPK-212ENST00000598896 EBLN2Q6P2I7 272 aa17.33■□□□□ 0.36
SYMPK-212ENST00000598896 C12orf54Q6X4T0 127 aa17.33■□□□□ 0.36
SYMPK-212ENST00000598896 OR2K2Q8NGT1 345 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 650.2 ms