RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 LINC00336Q6ZUF6 198 aa10.76□□□□□ -0.69
TGFB1-202ENST00000597453 OR8A1Q8NGG7 326 aa10.76□□□□□ -0.69
TGFB1-202ENST00000597453 STOML3Q8TAV4 291 aa10.76□□□□□ -0.69
TGFB1-202ENST00000597453 RPUSD4Q96CM3 377 aaKnown RBP10.76□□□□□ -0.69
TGFB1-202ENST00000597453 PSMG3Q9BT73 122 aaPredicted RBP10.76□□□□□ -0.69
TGFB1-202ENST00000597453 NACAE9PAV3 2078 aa10.76□□□□□ -0.69
TGFB1-202ENST00000597453 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 HTN3P15516 51 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 HIST1H1AQ02539 215 aaPredicted RBP10.75□□□□□ -0.69
TGFB1-202ENST00000597453 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 ACOT6Q3I5F7 207 aaPredicted RBP10.75□□□□□ -0.69
TGFB1-202ENST00000597453 HSD17B11Q8NBQ5 300 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 OR2G3Q8NGZ4 309 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 SUN5Q8TC36 379 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 MRPL53Q96EL3 112 aaKnown RBP10.75□□□□□ -0.69
TGFB1-202ENST00000597453 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 ARPC5LQ9BPX5 153 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 OR51M1Q9H341 326 aa10.75□□□□□ -0.69
TGFB1-202ENST00000597453 BORCS7-ASMTA0A0B4J1R7 106 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 M0R2Z0 102 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 RTL8CO15255 209 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 CRXO43186 299 aaPredicted RBP10.74□□□□□ -0.69
TGFB1-202ENST00000597453 OR7C2O60412 319 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 NDUFB4O95168 129 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 PRM2P04554 102 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 TAS2R45P59539 299 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 KHDC3LQ587J8 217 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 ALKAL2Q6UX46 152 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 FAM210BQ96KR6 192 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 PAXXQ9BUH6 204 aa10.74□□□□□ -0.69
TGFB1-202ENST00000597453 OR10J4P0C629 311 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 NBEAP1P0C6P0 100 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 ATP6V0CP27449 155 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 RAB2AP61019 212 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 SERF2P84101 59 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 RPL7L1Q6DKI1 246 aaKnown RBP10.73□□□□□ -0.69
TGFB1-202ENST00000597453 BLNKQ8WV28 456 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 GNPNAT1Q96EK6 184 aaPredicted RBP10.73□□□□□ -0.69
TGFB1-202ENST00000597453 TMEM208Q9BTX3 173 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 PRELID1Q9Y255 219 aa10.73□□□□□ -0.69
TGFB1-202ENST00000597453 IGLV2-18A0A075B6J9 118 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 ZNF705GA8MUZ8 300 aaPredicted RBP10.72□□□□□ -0.69
TGFB1-202ENST00000597453 TAAR5O14804 337 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 INSP01308 110 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 PRB4P10163 310 aaPredicted RBP10.72□□□□□ -0.69
TGFB1-202ENST00000597453 EIF5AP63241 154 aaKnown RBP10.72□□□□□ -0.69
TGFB1-202ENST00000597453 UBE2L3P68036 154 aaKnown RBP10.72□□□□□ -0.69
TGFB1-202ENST00000597453 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 TMEM88Q6PEY1 159 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 UQCC3Q6UW78 93 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 UBE2DNLQ8IWF7 75 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 BAP18Q8IXM2 172 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 OR10J6PQ8NGY7 276 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 RNF141Q8WVD5 230 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 ZNF503Q96F45 646 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 SH3BGRL3Q9H299 93 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 AAMDCQ9H7C9 122 aa10.72□□□□□ -0.69
TGFB1-202ENST00000597453 TRAV12-2A0A075B6T6 113 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 A0A1W2PPV4 95 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 PRSS29PA6NIE9 313 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 PRAC2D3DTV9 90 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 MBP02144 154 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 TPT1P13693 172 aaKnown RBP10.71□□□□□ -0.69
TGFB1-202ENST00000597453 DAD1P61803 113 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 FAM122CQ6P4D5 195 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 PQLC2Q6ZP29 291 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 OR10G4Q8NGN3 311 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 OR10G9Q8NGN4 311 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 OR10G7Q8NGN6 311 aa10.71□□□□□ -0.69
TGFB1-202ENST00000597453 ZNF471Q9BX82 626 aaPredicted RBP10.71□□□□□ -0.69
TGFB1-202ENST00000597453 RYR1P21817 5038 aa10.7□□□□□ -0.7
TGFB1-202ENST00000597453 RAB19A4D1S5 217 aa10.7□□□□□ -0.7
TGFB1-202ENST00000597453 NPIPB6E9PJ23 425 aa10.7□□□□□ -0.7
TGFB1-202ENST00000597453 M0R3E3 92 aa10.7□□□□□ -0.7
TGFB1-202ENST00000597453 CDC34P49427 236 aaPredicted RBP10.7□□□□□ -0.7
TGFB1-202ENST00000597453 Q6ZR54 194 aa10.7□□□□□ -0.7
TGFB1-202ENST00000597453 EXOC3-AS1Q8N2X6 119 aa10.7□□□□□ -0.7
TGFB1-202ENST00000597453 PCNPQ8WW12 178 aaKnown RBP10.7□□□□□ -0.7
TGFB1-202ENST00000597453 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
TGFB1-202ENST00000597453 PLAC8L1A1L4L8 177 aa10.69□□□□□ -0.7
TGFB1-202ENST00000597453 AZU1P20160 251 aa10.69□□□□□ -0.7
TGFB1-202ENST00000597453 ICAM4Q14773 271 aa10.69□□□□□ -0.7
TGFB1-202ENST00000597453 LYPD1Q8N2G4 141 aa10.69□□□□□ -0.7
TGFB1-202ENST00000597453 ODF3Q96PU9 254 aa10.69□□□□□ -0.7
TGFB1-202ENST00000597453 CYTL1Q9NRR1 136 aa10.69□□□□□ -0.7
TGFB1-202ENST00000597453 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
TGFB1-202ENST00000597453 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
TGFB1-202ENST00000597453 CDKN1BP46527 198 aa10.68□□□□□ -0.7
TGFB1-202ENST00000597453 RNF212Q495C1 297 aa10.68□□□□□ -0.7
TGFB1-202ENST00000597453 EIF5AL1Q6IS14 154 aaKnown RBP10.68□□□□□ -0.7
TGFB1-202ENST00000597453 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
TGFB1-202ENST00000597453 STAG3L2P0CL84 134 aa10.67□□□□□ -0.7
TGFB1-202ENST00000597453 STAG3L3P0CL85 134 aa10.67□□□□□ -0.7
TGFB1-202ENST00000597453 DEFB130BP0DP73 79 aa10.67□□□□□ -0.7
TGFB1-202ENST00000597453 DEFB130AP0DP74 79 aa10.67□□□□□ -0.7
TGFB1-202ENST00000597453 TSPOP30536 169 aa10.67□□□□□ -0.7
TGFB1-202ENST00000597453 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
TGFB1-202ENST00000597453 Q9H3A6 140 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms