RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ARL6IP6Q8N6S5 226 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 CYB561D1Q8N8Q1 229 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 OR10J6PQ8NGY7 276 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 HIST1H2BAQ96A08 127 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 CITED4Q96RK1 184 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 MAP6D1Q9H9H5 199 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 HERC1Q15751 4861 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 ZNF705FA8MVS1 300 aaPredicted RBP8.95□□□□□ -0.98
SHKBP1-213ENST00000597325 DIRC3C9JPN6 131 aa8.95□□□□□ -0.98
SHKBP1-213ENST00000597325 TCRAP04437 139 aa8.95□□□□□ -0.98
SHKBP1-213ENST00000597325 CNN1P51911 297 aaKnown RBP8.95□□□□□ -0.98
SHKBP1-213ENST00000597325 CEBPGP53567 150 aa8.95□□□□□ -0.98
SHKBP1-213ENST00000597325 EBLN2Q6P2I7 272 aa8.95□□□□□ -0.98
SHKBP1-213ENST00000597325 GOLT1AQ6ZVE7 132 aa8.95□□□□□ -0.98
SHKBP1-213ENST00000597325 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 TMEM250H0YL14 139 aa8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 UBE2G1P62253 170 aa8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 HIST1H1AQ02539 215 aaPredicted RBP8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 FOXI2Q6ZQN5 318 aa8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 C11orf52Q96A22 123 aa8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 FAM110AQ9BQ89 295 aa8.94□□□□□ -0.98
SHKBP1-213ENST00000597325 RBAKDNA6NC62 111 aa8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 FBLL1A6NHQ2 334 aaKnown RBP8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 DUSP14O95147 198 aaKnown RBP8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 SRP19P09132 144 aaKnown RBP8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 CD7P09564 240 aa8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 PRB4P10163 310 aaPredicted RBP8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 SRSF3P84103 164 aaKnown RBP8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 TMEM78Q5T7P6 136 aa8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 OR8A1Q8NGG7 326 aa8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 FMC1Q96HJ9 113 aa8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 SLC35B3Q9H1N7 401 aa8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
SHKBP1-213ENST00000597325 PRAC2D3DTV9 90 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 F6UB75 175 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 S100A9P06702 114 aaKnown RBP8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 ZNF674Q2M3X9 581 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 ACTL10Q5JWF8 245 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 APRG1Q8IVJ8 170 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 STHQ8IWL8 128 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 EIF4E3Q8N5X7 224 aaKnown RBP8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 TMEM75Q8N9X5 138 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 NDFIP1Q9BT67 221 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 PPP1R14DQ9NXH3 145 aa8.92□□□□□ -0.98
SHKBP1-213ENST00000597325 A0A0J9YX75 114 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 NPIPB6E9PJ23 425 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 SFTA3P0C7M3 94 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 HLA-DRB4P13762 266 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 RPL35P42766 123 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 DEFB1P60022 68 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 FLI1Q01543 452 aaPredicted RBP8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 Q86TA4 180 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 OR4B1Q8NGF8 309 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 C2CD4CQ8TF44 421 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 PRR25Q96S07 402 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 HLA-DRB4X5D2U9 266 aa8.91□□□□□ -0.98
SHKBP1-213ENST00000597325 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 TRAV34A0A0B4J273 112 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 C9JQL5 133 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 ZNF705DP0CH99 300 aaPredicted RBP8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 ZNF705BP0CI00 300 aaPredicted RBP8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 ZNF138P52744 262 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 ERCC8Q13216 396 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 ZNF124Q15973 351 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 TMEM183BQ1AE95 376 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 SOHLH1Q5JUK2 328 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 GDF5OSQ5U4N7 250 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 C9orf47Q6ZRZ4 202 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 PRNTQ86SH4 94 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 Q8TAT8 98 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 LINC00477Q96M19 166 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 VGLL1Q99990 258 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 SMIM7Q9BQ49 75 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 WFDC10AQ9H1F0 79 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 PARLQ9H300 379 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 PSG8Q9UQ74 426 aa8.9□□□□□ -0.98
SHKBP1-213ENST00000597325 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 IGKV3-20P01619 116 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 GNG4P50150 75 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 TAS2R60P59551 318 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 FAM74A3Q4VXF1 159 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 CENPWQ5EE01 88 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 SLC7A5P1Q8MH63 180 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 SGK494Q96LW2 274 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 LINC00479Q96M42 142 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 DERL1Q9BUN8 251 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 AGPAT4-IT1Q9H0P7 198 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 KLF12Q9Y4X4 402 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 VPS13DQ5THJ4 4388 aa8.89□□□□□ -0.99
SHKBP1-213ENST00000597325 TRBV6-1A0A0K0K1D8 114 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 H3BMM0 161 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 LEPP41159 167 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 SAPCD1Q5SSQ6 148 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 DEFB125Q8N687 156 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms