RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PYGO2Q9BRQ0 406 aa9.22□□□□□ -0.93
USE1-207ENST00000596136 LINC00467Q9BRT7 94 aa9.22□□□□□ -0.93
USE1-207ENST00000596136 TRAV12-3A0A0B4J271 114 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 TRBV7-9A0A0J9YWB2 115 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 RBAKDNA6NC62 111 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 CBY3A6NI87 242 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 OR7C2O60412 319 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 HTN1P15515 57 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 ZNF266Q14584 549 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 ACOT6Q3I5F7 207 aaPredicted RBP9.21□□□□□ -0.94
USE1-207ENST00000596136 KHDC3LQ587J8 217 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 FAM122CQ6P4D5 195 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 OR2G3Q8NGZ4 309 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 VGLL1Q99990 258 aa9.21□□□□□ -0.94
USE1-207ENST00000596136 IGKV2-40A0A087WW87 121 aaPredicted RBP9.2□□□□□ -0.94
USE1-207ENST00000596136 C7orf71A4D174 169 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 IGKV2D-40P01614 121 aaPredicted RBP9.2□□□□□ -0.94
USE1-207ENST00000596136 DEFB130BP0DP73 79 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 DEFB130AP0DP74 79 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 RANP62826 216 aaKnown RBP9.2□□□□□ -0.94
USE1-207ENST00000596136 RGS21Q2M5E4 152 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 PQLC2Q6ZP29 291 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 CCDC28AQ8IWP9 274 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 ZFAND2AQ8N6M9 145 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 POM121L12Q8N7R1 296 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 PSMG3Q9BT73 122 aaPredicted RBP9.2□□□□□ -0.94
USE1-207ENST00000596136 Q9H3A6 140 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 ZNF492Q9P255 531 aa9.2□□□□□ -0.94
USE1-207ENST00000596136 HTN3P15516 51 aa9.19□□□□□ -0.94
USE1-207ENST00000596136 UBE2L3P68036 154 aaKnown RBP9.19□□□□□ -0.94
USE1-207ENST00000596136 CD300CQ08708 224 aa9.19□□□□□ -0.94
USE1-207ENST00000596136 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
USE1-207ENST00000596136 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
USE1-207ENST00000596136 TMEM88Q6PEY1 159 aa9.19□□□□□ -0.94
USE1-207ENST00000596136 ARL6IP6Q8N6S5 226 aa9.19□□□□□ -0.94
USE1-207ENST00000596136 NOP10Q9NPE3 64 aaKnown RBP9.19□□□□□ -0.94
USE1-207ENST00000596136 A0A1W2PPV4 95 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 RNF222A6NCQ9 220 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 J3KRW8 73 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 ATP5G1P05496 136 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 CSN1S1P47710 185 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 ATP5G3P48201 142 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 ZNF138P52744 262 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 RAB2AP61019 212 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 SERF2P84101 59 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 ANXA2RQ3ZCQ2 193 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 RNF212Q495C1 297 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 C15orf53Q8NAA6 179 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 OR10G4Q8NGN3 311 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 OR10G9Q8NGN4 311 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 OR10G7Q8NGN6 311 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 TNFSF18Q9UNG2 199 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
USE1-207ENST00000596136 DNAH17Q9UFH2 4485 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 DNAH2Q9P225 4427 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 G3V3Q6 166 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 GPX1P07203 203 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 ATP6V0CP27449 155 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
USE1-207ENST00000596136 BTN1A1Q13410 526 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 PRR9Q5T870 116 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 HSD17B11Q8NBQ5 300 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 SUN5Q8TC36 379 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 TMED6Q8WW62 240 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
USE1-207ENST00000596136 SNURFLB1AK76 121 aa9.16□□□□□ -0.94
USE1-207ENST00000596136 EIF3GO75821 320 aaKnown RBP eCLIP9.16□□□□□ -0.94
USE1-207ENST00000596136 MBP02144 154 aa9.16□□□□□ -0.94
USE1-207ENST00000596136 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
USE1-207ENST00000596136 INO80EQ8NBZ0 244 aaPredicted RBP9.16□□□□□ -0.94
USE1-207ENST00000596136 ZNF680Q8NEM1 530 aa9.16□□□□□ -0.94
USE1-207ENST00000596136 OR2T35Q8NGX2 323 aa9.16□□□□□ -0.94
USE1-207ENST00000596136 C18orf15Q96N68 181 aa9.16□□□□□ -0.94
USE1-207ENST00000596136 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
USE1-207ENST00000596136 PGPA6NDG6 321 aa9.15□□□□□ -0.94
USE1-207ENST00000596136 F5H768 121 aa9.15□□□□□ -0.94
USE1-207ENST00000596136 CDC34P49427 236 aaPredicted RBP9.15□□□□□ -0.94
USE1-207ENST00000596136 IBA57Q5T440 356 aaKnown RBP9.15□□□□□ -0.94
USE1-207ENST00000596136 RAB24Q969Q5 203 aa9.15□□□□□ -0.94
USE1-207ENST00000596136 HECTD4Q9Y4D8 3996 aa9.15□□□□□ -0.95
USE1-207ENST00000596136 FXYD6-FXYD2A0A087WZ82 144 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 FAM3BP58499 235 aaPredicted RBP9.14□□□□□ -0.95
USE1-207ENST00000596136 LGALS9BQ3B8N2 356 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 FAM74A1Q5RGS3 127 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 RPL7L1Q6DKI1 246 aaKnown RBP9.14□□□□□ -0.95
USE1-207ENST00000596136 Q6ZQT7 251 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 Q8TAT8 98 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 GNPNAT1Q96EK6 184 aaPredicted RBP9.14□□□□□ -0.95
USE1-207ENST00000596136 GSN-AS1Q9NRJ2 163 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 MUC4Q99102 2169 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 FAT2Q9NYQ8 4349 aa9.14□□□□□ -0.95
USE1-207ENST00000596136 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 BORCS7-ASMTA0A0B4J1R7 106 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 GAGE12BA1L429 117 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms