RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 YTHDF2Q9Y5A9 579 aaKnown RBP7.95□□□□□ -1.14
VRK3-210ENST00000596121 BORCS7-ASMTA0A0B4J1R7 106 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 TRAV12-3A0A0B4J271 114 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 HMSDA8MTL9 139 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 CD300CQ08708 224 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 PQLC2Q6ZP29 291 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 LYPD1Q8N2G4 141 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 ZFAND2AQ8N6M9 145 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 SUN5Q8TC36 379 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 GNPNAT1Q96EK6 184 aaPredicted RBP7.94□□□□□ -1.14
VRK3-210ENST00000596121 LINC00477Q96M19 166 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 OTORQ9NRC9 128 aa7.94□□□□□ -1.14
VRK3-210ENST00000596121 TMEM189A5PLL7 270 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 PGPA6NDG6 321 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 KLLNB2CW77 178 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 DIRC3C9JPN6 131 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 TAAR5O14804 337 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 ZNF324O75467 553 aaPredicted RBP7.93□□□□□ -1.14
VRK3-210ENST00000596121 SPART-AS1P0CW21 52 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 HTN1P15515 57 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 CRISP2P16562 243 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 GCHFRP30047 84 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 TSPOP30536 169 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 LEPP41159 167 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 TAS2R60P59551 318 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 Q8TAT8 98 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 HYLS1Q96M11 299 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 ZNF492Q9P255 531 aa7.93□□□□□ -1.14
VRK3-210ENST00000596121 KLK5Q9Y337 293 aaPredicted RBP7.93□□□□□ -1.14
VRK3-210ENST00000596121 TRAV10A0A0B4J240 114 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 A0A1B0GVG6 124 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 H7BYZ3 331 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 JTBO76095 146 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 MBP02144 154 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 RNASE4P34096 147 aaKnown RBP7.92□□□□□ -1.14
VRK3-210ENST00000596121 ZNF345Q14585 488 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 TMEM256Q8N2U0 113 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 C2CD4CQ8TF44 421 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 LINC00476Q8WZB0 136 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 ARPC5LQ9BPX5 153 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 ACTR3CQ9C0K3 210 aaPredicted RBP7.92□□□□□ -1.14
VRK3-210ENST00000596121 TMPRSS5Q9H3S3 457 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 APLNQ9ULZ1 77 aa7.92□□□□□ -1.14
VRK3-210ENST00000596121 DEFB131BA0A096LNP1 70 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 C7orf71A4D174 169 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 C11orf94C9JXX5 98 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 SLC25A5P05141 298 aaKnown RBP7.91□□□□□ -1.14
VRK3-210ENST00000596121 ZNF138P52744 262 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 GNG5P63218 68 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 TMEM78Q5T7P6 136 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 RNASE8Q8TDE3 154 aaKnown RBP7.91□□□□□ -1.14
VRK3-210ENST00000596121 TVP23CQ96ET8 276 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 C20orf144Q9BQM9 153 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 NIPSNAP3BQ9BS92 247 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 KMT2AQ03164 3969 aa7.91□□□□□ -1.14
VRK3-210ENST00000596121 TRAV8-1A0A0A6YYK1 113 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 RBAKDNA6NC62 111 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 IGLL5B9A064 214 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 BCL2L11O43521 198 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 NMBP08949 121 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 FHITP49789 147 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 FGF8P55075 233 aaPredicted RBP7.9□□□□□ -1.14
VRK3-210ENST00000596121 GOLT1AQ6ZVE7 132 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 TMUB2Q71RG4 321 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 TCTE3Q8IZS6 198 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 RXFP4Q8TDU9 374 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 RPH3ALQ9UNE2 315 aa7.9□□□□□ -1.14
VRK3-210ENST00000596121 hCG_2014768A0A024R1R8 64 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 A0A0D9SG52 128 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 CTXND1A0A1B0GTU2 59 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 GGTLC3B5MD39 225 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 CXorf1O96002 111 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 GPX1P07203 203 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 CSN1S1P47710 185 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 LGALSLQ3ZCW2 172 aaPredicted RBP7.89□□□□□ -1.15
VRK3-210ENST00000596121 TMEM263Q8WUH6 116 aaKnown RBP7.89□□□□□ -1.15
VRK3-210ENST00000596121 SGK494Q96LW2 274 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 NOP10Q9NPE3 64 aaKnown RBP7.89□□□□□ -1.15
VRK3-210ENST00000596121 TP53TG3Q9ULZ0 132 aa7.89□□□□□ -1.15
VRK3-210ENST00000596121 IGHV4-4A0A075B6R2 117 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 LYRM9A8MSI8 78 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 LY6G6CO95867 125 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 IGLV2-11P01706 119 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 DEFB130BP0DP73 79 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 DEFB130AP0DP74 79 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 DAD1P61803 113 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 SUMO1P63165 101 aaKnown RBP7.88□□□□□ -1.15
VRK3-210ENST00000596121 AKR1C8PQ5T2L2 129 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 ZNF493Q6ZR52 646 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 ARL6IP6Q8N6S5 226 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 C11orf72Q8NBR9 251 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 C16orf74Q96GX8 76 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 PYGO2Q9BRQ0 406 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 LINC00467Q9BRT7 94 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 ZNF471Q9BX82 626 aaPredicted RBP7.88□□□□□ -1.15
VRK3-210ENST00000596121 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
VRK3-210ENST00000596121 TRBV7-9A0A0J9YWB2 115 aa7.87□□□□□ -1.15
VRK3-210ENST00000596121 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
VRK3-210ENST00000596121 TCRAP04437 139 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms