RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CRISP2P16562 243 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 GCSHP23434 173 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 CAMLGP49069 296 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 HAMPP81172 84 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 FHL2Q14192 279 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
LIG1-209ENST00000596104 MIC13Q5XKP0 118 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 NRARPQ7Z6K4 114 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 ZFAND2AQ8N6M9 145 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 LINC00477Q96M19 166 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
LIG1-209ENST00000596104 TP53TG3Q9ULZ0 132 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 PRAF2O60831 178 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 MPDU1O75352 247 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 MBPP02686 304 aaPredicted RBP6.73□□□□□ -1.33
LIG1-209ENST00000596104 RNASE4P34096 147 aaKnown RBP6.73□□□□□ -1.33
LIG1-209ENST00000596104 SLAQ13239 276 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 PRR9Q5T870 116 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 Q6ZQT7 251 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 Q6ZRG5 221 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 NEGR1Q7Z3B1 354 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 WFDC10BQ8IUB3 73 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 C8orf49Q96NF6 230 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 MSRB1Q9NZV6 116 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 GSKIPQ9P0R6 139 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 HHLA3Q9XRX5 114 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 WDR83OSQ9Y284 106 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 LY96Q9Y6Y9 160 aa6.73□□□□□ -1.33
LIG1-209ENST00000596104 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 K7EP13 123 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 NMBP08949 121 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 C9orf47Q6ZRZ4 202 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 Q6ZSN1 163 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 OR1L4Q8NGR5 311 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 MRPL32Q9BYC8 188 aaKnown RBP6.72□□□□□ -1.33
LIG1-209ENST00000596104 SRRQ9GZT4 340 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 C11orf1Q9H5F2 150 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 SLC39A9Q9NUM3 307 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 TMEM14CQ9P0S9 112 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 PRELID1Q9Y255 219 aa6.72□□□□□ -1.33
LIG1-209ENST00000596104 IGHV1OR15-1A0A075B7D0 117 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 IGKV2-40A0A087WW87 121 aaPredicted RBP6.71□□□□□ -1.34
LIG1-209ENST00000596104 NAP1L6A6NFF2 107 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 K7EQD1 137 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 RGS13O14921 159 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 NOL3O60936 208 aaKnown RBP6.71□□□□□ -1.34
LIG1-209ENST00000596104 CST7O76096 145 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 IGKV2D-40P01614 121 aaPredicted RBP6.71□□□□□ -1.34
LIG1-209ENST00000596104 GPX1P07203 203 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 HIST1H1EP10412 219 aaKnown RBP6.71□□□□□ -1.34
LIG1-209ENST00000596104 RPL29P47914 159 aaKnown RBP6.71□□□□□ -1.34
LIG1-209ENST00000596104 RAB31Q13636 194 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 PDE6HQ13956 83 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 VWC2Q2TAL6 325 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 IQCF2Q8IXL9 164 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 EXOC3-AS1Q8N2X6 119 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 MITD1Q8WV92 249 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 PFDN5Q99471 154 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 TMEM70Q9BUB7 260 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 UQCC1Q9NVA1 299 aa6.71□□□□□ -1.34
LIG1-209ENST00000596104 LRCOL1A6NCL2 159 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 E5RGE8 158 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 PYYP10082 97 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 EVI2AP22794 236 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 BTCP35070 178 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 BAK1Q16611 211 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 C12orf45Q8N5I9 185 aaPredicted RBP6.7□□□□□ -1.34
LIG1-209ENST00000596104 CHAC2Q8WUX2 184 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 ARPC5LQ9BPX5 153 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 ZNF492Q9P255 531 aa6.7□□□□□ -1.34
LIG1-209ENST00000596104 IGLV5-52A0A0A0MRZ9 124 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 TRGV4A0A0C4DH28 118 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 FAM24AA6NFZ4 105 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 L7N2F9 121 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 CCSO14618 274 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 CRYGDP07320 174 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 SFTA3P0C7M3 94 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 GYPEP15421 78 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 SRIP30626 198 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 S100A5P33763 92 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 CAV2P51636 162 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 VAMP2P63027 116 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 ZNF415Q09FC8 603 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 TMEM78Q5T7P6 136 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 OR10G4Q8NGN3 311 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
LIG1-209ENST00000596104 ZNF479Q96JC4 524 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 TIMM9Q9Y5J7 89 aa6.69□□□□□ -1.34
LIG1-209ENST00000596104 TRBV7-9A0A0J9YWB2 115 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 UBE2L5PA0A1B0GUS4 154 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 J3QL48 77 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 ORM1P02763 201 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 BCAP31P51572 246 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 GCSAMLQ5JQS6 135 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 FAM122CQ6P4D5 195 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 C10orf126Q8N4M7 172 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 Q8TAT8 98 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 BLNKQ8WV28 456 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms