RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 NEU1Q99519 415 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 TMPRSS5Q9H3S3 457 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 OTORQ9NRC9 128 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 DIRC3C9JPN6 131 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 CXorf1O96002 111 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 HBE1P02100 147 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 LEPP41159 167 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 GNG5P63218 68 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 SUN5Q8TC36 379 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 FAM19A4Q96LR4 140 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 ODF3Q96PU9 254 aa9.9□□□□□ -0.82
SHKBP1-207ENST00000595631 TRAV12-3A0A0B4J271 114 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 LOC102723971A0A1B0GUV8 181 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 SMIM9A6NGZ8 99 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 AZU1P20160 251 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 TSPOP30536 169 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 CSN1S1P47710 185 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 RRN3P1Q2M238 152 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 PRR9Q5T870 116 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 LINC00477Q96M19 166 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 LINC01587Q99440 93 aa9.89□□□□□ -0.83
SHKBP1-207ENST00000595631 MAP1LC3B2A6NCE7 125 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 SLC25A5P05141 298 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 SEC11BP0C7V7 166 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 HTN1P15515 57 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 BTN1A1Q13410 526 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 MAP1LC3BQ9GZQ8 125 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 TMEM167BQ9NRX6 74 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 ZNF492Q9P255 531 aa9.88□□□□□ -0.83
SHKBP1-207ENST00000595631 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 TPT1P13693 172 aaKnown RBP9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 ZNF138P52744 262 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 UBE2G2P60604 165 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 Q6ZQT7 251 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 GOLT1AQ6ZVE7 132 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 CMTM2Q8TAZ6 248 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 FAM213BQ8TBF2 198 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 RXFP4Q8TDU9 374 aa9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 PHLDA1Q8WV24 401 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 YTHDF2Q9Y5A9 579 aaKnown RBP9.87□□□□□ -0.83
SHKBP1-207ENST00000595631 STARD9Q9P2P6 4700 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 TRAV8-1A0A0A6YYK1 113 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 A0A1B0GV50 99 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 PLAC8L1A1L4L8 177 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 C7orf71A4D174 169 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 RBAKDNA6NC62 111 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 KLLNB2CW77 178 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 CRISP2P16562 243 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 RNASE4P34096 147 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 SUMO1P63165 101 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 C12orf74Q32Q52 190 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 FAM74A1Q5RGS3 127 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 FAM222AQ5U5X8 452 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 Q6ZTC4 211 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 TMEM256Q8N2U0 113 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 C9orf62Q8N4C0 152 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 STOML3Q8TAV4 291 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 SGK494Q96LW2 274 aa9.86□□□□□ -0.83
SHKBP1-207ENST00000595631 H7BYZ3 331 aa9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 GPX1P07203 203 aa9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 TAS2R60P59551 318 aa9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 EIF5AP63241 154 aaKnown RBP9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 ZFP69Q49AA0 526 aa9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 CEMP1Q6PRD7 247 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 C20orf144Q9BQM9 153 aa9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 DKK2Q9UBU2 259 aa9.85□□□□□ -0.83
SHKBP1-207ENST00000595631 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 UMAD1C9J7I0 102 aa9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 ZNF324O75467 553 aaPredicted RBP9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 TCRAP04437 139 aa9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 NKX2-5P52952 324 aaPredicted RBP9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 C5orf17Q8NAS9 161 aa9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 TVP23CQ96ET8 276 aa9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 NIPSNAP3BQ9BS92 247 aa9.84□□□□□ -0.83
SHKBP1-207ENST00000595631 TENM2Q9NT68 2774 aa9.83□□□□□ -0.84
SHKBP1-207ENST00000595631 A0A1W2PRE2 83 aa9.83□□□□□ -0.84
SHKBP1-207ENST00000595631 FAM74A7A6NL05 159 aa9.83□□□□□ -0.84
SHKBP1-207ENST00000595631 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
SHKBP1-207ENST00000595631 RNASE8Q8TDE3 154 aaKnown RBP9.83□□□□□ -0.84
SHKBP1-207ENST00000595631 SFT2D1Q8WV19 159 aa9.83□□□□□ -0.84
SHKBP1-207ENST00000595631 EPDR1Q9UM22 224 aa9.83□□□□□ -0.84
SHKBP1-207ENST00000595631 F6UZH7 168 aa9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 NMBP08949 121 aa9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 SLC51BQ86UW2 128 aa9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 ARL6IP6Q8N6S5 226 aa9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 MBD3L1Q8WWY6 194 aa9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 C16orf74Q96GX8 76 aa9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
SHKBP1-207ENST00000595631 TRAV34A0A0B4J273 112 aa9.81□□□□□ -0.84
SHKBP1-207ENST00000595631 TRBV7-9A0A0J9YWB2 115 aa9.81□□□□□ -0.84
SHKBP1-207ENST00000595631 IGLV2-11P01706 119 aa9.81□□□□□ -0.84
SHKBP1-207ENST00000595631 DPPA3Q6W0C5 159 aa9.81□□□□□ -0.84
SHKBP1-207ENST00000595631 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
SHKBP1-207ENST00000595631 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms