RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 HTN3P15516 51 aa11.18□□□□□ -0.62
ZNF550-207ENST00000595560 CRISP2P16562 243 aa11.18□□□□□ -0.62
ZNF550-207ENST00000595560 OR2G3Q8NGZ4 309 aa11.18□□□□□ -0.62
ZNF550-207ENST00000595560 PYGO2Q9BRQ0 406 aa11.18□□□□□ -0.62
ZNF550-207ENST00000595560 A0A1W2PPV4 95 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 C7orf71A4D174 169 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 NMBP08949 121 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 DEFB130BP0DP73 79 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 DEFB130AP0DP74 79 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 RAB2AP61019 212 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
ZNF550-207ENST00000595560 TMEM78Q5T7P6 136 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 PQLC2Q6ZP29 291 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 CCDC28AQ8IWP9 274 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 HSD17B11Q8NBQ5 300 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 VGLL1Q99990 258 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 PSMG3Q9BT73 122 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-207ENST00000595560 Q9H3A6 140 aa11.17□□□□□ -0.62
ZNF550-207ENST00000595560 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
ZNF550-207ENST00000595560 VPS13DQ5THJ4 4388 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 RBAKDNA6NC62 111 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 P0DMU3 169 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 FAM231AP0DMU4 169 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 FAM231CP0DMU5 169 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 CSN1S1P47710 185 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
ZNF550-207ENST00000595560 OR2T35Q8NGX2 323 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 NOP10Q9NPE3 64 aaKnown RBP11.16□□□□□ -0.62
ZNF550-207ENST00000595560 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
ZNF550-207ENST00000595560 FXYD6-FXYD2A0A087WZ82 144 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 RNF222A6NCQ9 220 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 ATP6V0CP27449 155 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 BTN1A1Q13410 526 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 OR10G4Q8NGN3 311 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 OR10G9Q8NGN4 311 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 OR10G7Q8NGN6 311 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 LINC00467Q9BRT7 94 aa11.15□□□□□ -0.62
ZNF550-207ENST00000595560 CBY3A6NI87 242 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
ZNF550-207ENST00000595560 EIF3GO75821 320 aaKnown RBP eCLIP11.14□□□□□ -0.63
ZNF550-207ENST00000595560 ATP5G1P05496 136 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 GPX1P07203 203 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 ATP5G3P48201 142 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 ZNF138P52744 262 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 SERF2P84101 59 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 CD300CQ08708 224 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 LINC00612Q8N6U2 182 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 RXFP4Q8TDU9 374 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 OTORQ9NRC9 128 aa11.14□□□□□ -0.63
ZNF550-207ENST00000595560 DNAH6Q9C0G6 4158 aa11.13□□□□□ -0.63
ZNF550-207ENST00000595560 SNURFLB1AK76 121 aa11.13□□□□□ -0.63
ZNF550-207ENST00000595560 DIRC3C9JPN6 131 aa11.13□□□□□ -0.63
ZNF550-207ENST00000595560 G3V3Q6 166 aa11.13□□□□□ -0.63
ZNF550-207ENST00000595560 MBP02144 154 aa11.13□□□□□ -0.63
ZNF550-207ENST00000595560 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
ZNF550-207ENST00000595560 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
ZNF550-207ENST00000595560 POM121L12Q8N7R1 296 aa11.13□□□□□ -0.63
ZNF550-207ENST00000595560 Q8TAT8 98 aa11.13□□□□□ -0.63
ZNF550-207ENST00000595560 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
ZNF550-207ENST00000595560 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 FAM74A1Q5RGS3 127 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 PRR9Q5T870 116 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 C15orf53Q8NAA6 179 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 ZNF680Q8NEM1 530 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 SH3BGRL3Q9H299 93 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
ZNF550-207ENST00000595560 BORCS7-ASMTA0A0B4J1R7 106 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 F5H768 121 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 HMGB3O15347 200 aaKnown RBP11.11□□□□□ -0.63
ZNF550-207ENST00000595560 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 STAG3L3P0CL85 134 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 RPL7L1Q6DKI1 246 aaKnown RBP11.11□□□□□ -0.63
ZNF550-207ENST00000595560 EIF4E3Q8N5X7 224 aaKnown RBP11.11□□□□□ -0.63
ZNF550-207ENST00000595560 C11orf72Q8NBR9 251 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 CMTM2Q8TAZ6 248 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 TMED6Q8WW62 240 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 RAB24Q969Q5 203 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
ZNF550-207ENST00000595560 HYLS1Q96M11 299 aa11.11□□□□□ -0.63
ZNF550-207ENST00000595560 FRAS1Q86XX4 4008 aa11.1□□□□□ -0.63
ZNF550-207ENST00000595560 PGPA6NDG6 321 aa11.1□□□□□ -0.63
ZNF550-207ENST00000595560 NACAE9PAV3 2078 aa11.1□□□□□ -0.63
ZNF550-207ENST00000595560 RGS13O14921 159 aa11.09□□□□□ -0.63
ZNF550-207ENST00000595560 RNF212Q495C1 297 aa11.09□□□□□ -0.63
ZNF550-207ENST00000595560 IBA57Q5T440 356 aaKnown RBP11.09□□□□□ -0.63
ZNF550-207ENST00000595560 SUN5Q8TC36 379 aa11.09□□□□□ -0.63
ZNF550-207ENST00000595560 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
ZNF550-207ENST00000595560 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 TAAR5O14804 337 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 ARPC5O15511 151 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 GAGE7O76087 117 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 GAGE12FP0CL80 117 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 GAGE12GP0CL81 117 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms