RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CXorf65A6NEN9 183 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 H7BYZ3 331 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 PPP1R2P9O14990 202 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 ERCC8Q13216 396 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 C9orf47Q6ZRZ4 202 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 FAM24BQ8N5W8 94 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 TRAV2A0A0B4J234 112 aa15.59■□□□□ 0.09
PNKP-203ENST00000593946 ERVFC1-1P60608 527 aa15.59■□□□□ 0.09
PNKP-203ENST00000593946 RBPMS2Q6ZRY4 209 aaKnown RBP15.59■□□□□ 0.09
PNKP-203ENST00000593946 OR10G8Q8NGN5 311 aa15.59■□□□□ 0.09
PNKP-203ENST00000593946 Q8TAT8 98 aa15.59■□□□□ 0.09
PNKP-203ENST00000593946 PRR25Q96S07 402 aa15.59■□□□□ 0.09
PNKP-203ENST00000593946 ASCL2Q99929 193 aa15.59■□□□□ 0.09
PNKP-203ENST00000593946 RNASE7Q9H1E1 156 aaKnown RBP15.59■□□□□ 0.09
PNKP-203ENST00000593946 OSTCQ9NRP0 149 aa15.59■□□□□ 0.09
PNKP-203ENST00000593946 VWFP04275 2813 aa15.58■□□□□ 0.08
PNKP-203ENST00000593946 PF4P02776 101 aa15.58■□□□□ 0.08
PNKP-203ENST00000593946 SNRPD3P62318 126 aaKnown RBP15.58■□□□□ 0.08
PNKP-203ENST00000593946 CD300EQ496F6 205 aaPredicted RBP15.58■□□□□ 0.08
PNKP-203ENST00000593946 FAM231DQ6ZW35 169 aa15.58■□□□□ 0.08
PNKP-203ENST00000593946 COX8CQ7Z4L0 72 aa15.58■□□□□ 0.08
PNKP-203ENST00000593946 AGPAT4-IT1Q9H0P7 198 aa15.58■□□□□ 0.08
PNKP-203ENST00000593946 BIN3Q9NQY0 253 aa15.58■□□□□ 0.08
PNKP-203ENST00000593946 FBN1P35555 2871 aaKnown RBP15.58■□□□□ 0.08
PNKP-203ENST00000593946 ZNF688P0C7X2 276 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 SMUG1Q53HV7 270 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 SAPCD1Q5SSQ6 148 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 IBA57Q5T440 356 aaKnown RBP15.57■□□□□ 0.08
PNKP-203ENST00000593946 PRR27Q6MZM9 219 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 LINC00482Q8N8I6 264 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 ZC2HC1AQ96GY0 325 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 PPP1R14DQ9NXH3 145 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 TRAV25A0A0B4J276 109 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 TMEM78Q5T7P6 136 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 C15orf54Q8N8G6 183 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 C8orf49Q96NF6 230 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 GPR61Q9BZJ8 451 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 ZNF492Q9P255 531 aa15.57■□□□□ 0.08
PNKP-203ENST00000593946 NPIPB6E9PJ23 425 aa15.56■□□□□ 0.08
PNKP-203ENST00000593946 DEFB1P60022 68 aa15.56■□□□□ 0.08
PNKP-203ENST00000593946 LINC00322Q6ZN03 302 aaPredicted RBP15.56■□□□□ 0.08
PNKP-203ENST00000593946 OR8A1Q8NGG7 326 aa15.56■□□□□ 0.08
PNKP-203ENST00000593946 OR10J6PQ8NGY7 276 aa15.56■□□□□ 0.08
PNKP-203ENST00000593946 YPEL4Q96NS1 127 aa15.56■□□□□ 0.08
PNKP-203ENST00000593946 V9GYV3 84 aa15.56■□□□□ 0.08
PNKP-203ENST00000593946 ZNF705DP0CH99 300 aaPredicted RBP15.55■□□□□ 0.08
PNKP-203ENST00000593946 ZNF705BP0CI00 300 aaPredicted RBP15.55■□□□□ 0.08
PNKP-203ENST00000593946 ZNF138P52744 262 aa15.55■□□□□ 0.08
PNKP-203ENST00000593946 PSMG4Q5JS54 123 aa15.55■□□□□ 0.08
PNKP-203ENST00000593946 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.55■□□□□ 0.08
PNKP-203ENST00000593946 C19orf71A6NCJ1 209 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 F6UB75 175 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 NUDT10Q8NFP7 164 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 NUDT11Q96G61 164 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 SPAG8Q99932 426 aaPredicted RBP15.54■□□□□ 0.08
PNKP-203ENST00000593946 NDFIP1Q9BT67 221 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 AGRNO00468 2067 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 SAP30O75446 220 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 LINC00477Q96M19 166 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 URGCP-MRPS24S4R325 110 aa15.54■□□□□ 0.08
PNKP-203ENST00000593946 IZUMO1RA6ND01 250 aa15.53■□□□□ 0.08
PNKP-203ENST00000593946 HIST1H1AQ02539 215 aaPredicted RBP15.53■□□□□ 0.08
PNKP-203ENST00000593946 ELOBQ15370 118 aa15.53■□□□□ 0.08
PNKP-203ENST00000593946 LENEPQ9Y5L5 61 aa15.53■□□□□ 0.08
PNKP-203ENST00000593946 COLCA2A8K830 154 aa15.52■□□□□ 0.08
PNKP-203ENST00000593946 IGLV1-51P01701 117 aa15.52■□□□□ 0.08
PNKP-203ENST00000593946 PFN1P07737 140 aaKnown RBP15.52■□□□□ 0.08
PNKP-203ENST00000593946 CT45A10P0DMU9 189 aa15.52■□□□□ 0.08
PNKP-203ENST00000593946 CRIP1P50238 77 aa15.52■□□□□ 0.08
PNKP-203ENST00000593946 IMMP2LQ96T52 175 aa15.52■□□□□ 0.08
PNKP-203ENST00000593946 ZNF256Q9Y2P7 627 aaPredicted RBP15.52■□□□□ 0.08
PNKP-203ENST00000593946 ZNF705GA8MUZ8 300 aaPredicted RBP15.51■□□□□ 0.07
PNKP-203ENST00000593946 OR4C46A6NHA9 309 aa15.51■□□□□ 0.07
PNKP-203ENST00000593946 GATCO43716 136 aaKnown RBP15.51■□□□□ 0.07
PNKP-203ENST00000593946 GDF5OSQ5U4N7 250 aa15.51■□□□□ 0.07
PNKP-203ENST00000593946 A0A0J9YX75 114 aa15.5■□□□□ 0.07
PNKP-203ENST00000593946 P01737 135 aa15.5■□□□□ 0.07
PNKP-203ENST00000593946 DAZAP1Q96EP5 407 aaKnown RBP15.5■□□□□ 0.07
PNKP-203ENST00000593946 IL36BQ9NZH7 164 aa15.5■□□□□ 0.07
PNKP-203ENST00000593946 S100PP25815 95 aa15.49■□□□□ 0.07
PNKP-203ENST00000593946 OR2K2Q8NGT1 345 aa15.49■□□□□ 0.07
PNKP-203ENST00000593946 FAM19A4Q96LR4 140 aa15.49■□□□□ 0.07
PNKP-203ENST00000593946 ZNF747Q9BV97 191 aa15.49■□□□□ 0.07
PNKP-203ENST00000593946 STAB1Q9NY15 2570 aa15.49■□□□□ 0.07
PNKP-203ENST00000593946 TRBV7-9A0A0J9YWB2 115 aa15.48■□□□□ 0.07
PNKP-203ENST00000593946 ZNF80P51504 273 aaPredicted RBP15.48■□□□□ 0.07
PNKP-203ENST00000593946 FAM162BQ5T6X4 162 aa15.48■□□□□ 0.07
PNKP-203ENST00000593946 KCNIP4Q6PIL6 250 aa15.48■□□□□ 0.07
PNKP-203ENST00000593946 FOXI2Q6ZQN5 318 aa15.48■□□□□ 0.07
PNKP-203ENST00000593946 SAV1Q9H4B6 383 aaPredicted RBP15.48■□□□□ 0.07
PNKP-203ENST00000593946 RPP21Q9H633 154 aaKnown RBP15.48■□□□□ 0.07
PNKP-203ENST00000593946 CA1P00915 261 aaPredicted RBP15.48■□□□□ 0.07
PNKP-203ENST00000593946 DEFB131AP59861 70 aa15.48■□□□□ 0.07
PNKP-203ENST00000593946 CT83Q5H943 113 aa15.48■□□□□ 0.07
PNKP-203ENST00000593946 OR4B1Q8NGF8 309 aa15.48■□□□□ 0.07
PNKP-203ENST00000593946 TRBV24-1A0A075B6N3 115 aa15.47■□□□□ 0.07
PNKP-203ENST00000593946 TGIF2-C20orf24A0A0A6YYL0 155 aa15.47■□□□□ 0.07
PNKP-203ENST00000593946 SH2D1AO60880 128 aa15.47■□□□□ 0.07
PNKP-203ENST00000593946 CXCL1P09341 107 aa15.47■□□□□ 0.07
PNKP-203ENST00000593946 CD33P20138 364 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms