RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PRELID1Q9Y255 219 aa16.49■□□□□ 0.23
LSM4-202ENST00000593564 TRAV6A0A075B6T7 132 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 A0A096LPF7 62 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 IGSF23A1L1A6 192 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 ZNF324O75467 553 aaPredicted RBP16.48■□□□□ 0.23
LSM4-202ENST00000593564 NDUFB4O95168 129 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 HIST1H1EP10412 219 aaKnown RBP16.48■□□□□ 0.23
LSM4-202ENST00000593564 KRTAP10-2P60368 255 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 PDE6HQ13956 83 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 ANXA2RQ3ZCQ2 193 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 Q8N1X5 172 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 TMEM252Q8N6L7 170 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 LINC00477Q96M19 166 aa16.48■□□□□ 0.23
LSM4-202ENST00000593564 S100A10P60903 97 aa16.47■□□□□ 0.23
LSM4-202ENST00000593564 HBG1P69891 147 aa16.47■□□□□ 0.23
LSM4-202ENST00000593564 HBG2P69892 147 aa16.47■□□□□ 0.23
LSM4-202ENST00000593564 STX12Q86Y82 276 aa16.47■□□□□ 0.23
LSM4-202ENST00000593564 EIF4E3Q8N5X7 224 aaKnown RBP16.47■□□□□ 0.23
LSM4-202ENST00000593564 AGPAT4-IT1Q9H0P7 198 aa16.47■□□□□ 0.23
LSM4-202ENST00000593564 NUDT15Q9NV35 164 aa16.47■□□□□ 0.23
LSM4-202ENST00000593564 TIMM9Q9Y5J7 89 aa16.47■□□□□ 0.23
LSM4-202ENST00000593564 TRGV1A0A0A0MS02 117 aa16.46■□□□□ 0.23
LSM4-202ENST00000593564 CD300CQ08708 224 aa16.46■□□□□ 0.23
LSM4-202ENST00000593564 IL15RAQ13261 267 aa16.46■□□□□ 0.23
LSM4-202ENST00000593564 BTN1A1Q13410 526 aa16.46■□□□□ 0.23
LSM4-202ENST00000593564 FUT9Q9Y231 359 aa16.46■□□□□ 0.23
LSM4-202ENST00000593564 PYYP10082 97 aa16.45■□□□□ 0.22
LSM4-202ENST00000593564 CRISP2P16562 243 aa16.45■□□□□ 0.22
LSM4-202ENST00000593564 FGF7P21781 194 aa16.45■□□□□ 0.22
LSM4-202ENST00000593564 ATP6V1FQ16864 119 aa16.45■□□□□ 0.22
LSM4-202ENST00000593564 SPINK4O60575 86 aa16.44■□□□□ 0.22
LSM4-202ENST00000593564 MPDU1O75352 247 aa16.44■□□□□ 0.22
LSM4-202ENST00000593564 RNASE4P34096 147 aaKnown RBP16.44■□□□□ 0.22
LSM4-202ENST00000593564 TCL1AP56279 114 aa16.44■□□□□ 0.22
LSM4-202ENST00000593564 RAB32Q13637 225 aa16.44■□□□□ 0.22
LSM4-202ENST00000593564 C9orf47Q6ZRZ4 202 aa16.44■□□□□ 0.22
LSM4-202ENST00000593564 NMBP08949 121 aa16.43■□□□□ 0.22
LSM4-202ENST00000593564 LINC00315P59091 139 aa16.43■□□□□ 0.22
LSM4-202ENST00000593564 EXOC3-AS1Q8N2X6 119 aa16.43■□□□□ 0.22
LSM4-202ENST00000593564 BLNKQ8WV28 456 aa16.43■□□□□ 0.22
LSM4-202ENST00000593564 AAMDCQ9H7C9 122 aa16.43■□□□□ 0.22
LSM4-202ENST00000593564 KLF12Q9Y4X4 402 aa16.43■□□□□ 0.22
LSM4-202ENST00000593564 GPX1P07203 203 aa16.42■□□□□ 0.22
LSM4-202ENST00000593564 GCSAMLQ5JQS6 135 aa16.42■□□□□ 0.22
LSM4-202ENST00000593564 IBA57Q5T440 356 aaKnown RBP16.42■□□□□ 0.22
LSM4-202ENST00000593564 NPCDR1Q9BY65 106 aa16.42■□□□□ 0.22
LSM4-202ENST00000593564 GPN1Q9HCN4 374 aaPredicted RBP16.42■□□□□ 0.22
LSM4-202ENST00000593564 SCRT2Q9NQ03 307 aa16.42■□□□□ 0.22
LSM4-202ENST00000593564 SIVA1O15304 175 aa16.41■□□□□ 0.22
LSM4-202ENST00000593564 Q6ZRN7 208 aaPredicted RBP16.41■□□□□ 0.22
LSM4-202ENST00000593564 ZFAND2AQ8N6M9 145 aa16.41■□□□□ 0.22
LSM4-202ENST00000593564 ST6GAL2Q96JF0 529 aa16.41■□□□□ 0.22
LSM4-202ENST00000593564 SLC25A2Q9BXI2 301 aa16.41■□□□□ 0.22
LSM4-202ENST00000593564 IGKV2-40A0A087WW87 121 aaPredicted RBP16.4■□□□□ 0.22
LSM4-202ENST00000593564 IGKV2D-40P01614 121 aaPredicted RBP16.4■□□□□ 0.22
LSM4-202ENST00000593564 H2AFB2P0C5Z0 115 aa16.4■□□□□ 0.22
LSM4-202ENST00000593564 ICAM4Q14773 271 aa16.4■□□□□ 0.22
LSM4-202ENST00000593564 TMEM78Q5T7P6 136 aa16.4■□□□□ 0.22
LSM4-202ENST00000593564 ICOSQ9Y6W8 199 aa16.4■□□□□ 0.22
LSM4-202ENST00000593564 PAX4O43316 350 aa16.39■□□□□ 0.21
LSM4-202ENST00000593564 PRR9Q5T870 116 aa16.39■□□□□ 0.21
LSM4-202ENST00000593564 FAM167A-AS1Q96KT0 104 aa16.39■□□□□ 0.21
LSM4-202ENST00000593564 VGLL1Q99990 258 aa16.39■□□□□ 0.21
LSM4-202ENST00000593564 ZNF492Q9P255 531 aa16.39■□□□□ 0.21
LSM4-202ENST00000593564 RGS13O14921 159 aa16.38■□□□□ 0.21
LSM4-202ENST00000593564 FAM122CQ6P4D5 195 aa16.38■□□□□ 0.21
LSM4-202ENST00000593564 TP53TG3Q9ULZ0 132 aa16.38■□□□□ 0.21
LSM4-202ENST00000593564 IGHV1OR15-1A0A075B7D0 117 aa16.37■□□□□ 0.21
LSM4-202ENST00000593564 NXPH4O95158 308 aa16.37■□□□□ 0.21
LSM4-202ENST00000593564 MIR17HGQ75NE6 70 aa16.37■□□□□ 0.21
LSM4-202ENST00000593564 CCDC32Q9BV29 185 aa16.37■□□□□ 0.21
LSM4-202ENST00000593564 MRPL16Q9NX20 251 aaKnown RBP16.37■□□□□ 0.21
LSM4-202ENST00000593564 PRO0255Q9UI72 69 aa16.37■□□□□ 0.21
LSM4-202ENST00000593564 IGHV3-53P01767 116 aa16.36■□□□□ 0.21
LSM4-202ENST00000593564 NBEAP1P0C6P0 100 aa16.36■□□□□ 0.21
LSM4-202ENST00000593564 SLAQ13239 276 aa16.36■□□□□ 0.21
LSM4-202ENST00000593564 Q6ZQT7 251 aa16.36■□□□□ 0.21
LSM4-202ENST00000593564 THAP6Q8TBB0 222 aa16.36■□□□□ 0.21
LSM4-202ENST00000593564 ARPC5LQ9BPX5 153 aa16.36■□□□□ 0.21
LSM4-202ENST00000593564 TRBV7-9A0A0J9YWB2 115 aa16.35■□□□□ 0.21
LSM4-202ENST00000593564 FAM240BA0A1B0GVZ2 78 aa16.35■□□□□ 0.21
LSM4-202ENST00000593564 OR5C1Q8NGR4 320 aa16.35■□□□□ 0.21
LSM4-202ENST00000593564 OR51M1Q9H341 326 aa16.35■□□□□ 0.21
LSM4-202ENST00000593564 ZNF138P52744 262 aa16.34■□□□□ 0.21
LSM4-202ENST00000593564 CRYBA4P53673 196 aa16.34■□□□□ 0.21
LSM4-202ENST00000593564 NHLH2Q02577 135 aa16.34■□□□□ 0.21
LSM4-202ENST00000593564 PGPEP1Q9NXJ5 209 aa16.34■□□□□ 0.21
LSM4-202ENST00000593564 ZNF415Q09FC8 603 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 FHL2Q14192 279 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 FXYD5Q96DB9 178 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 PAXXQ9BUH6 204 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 MRPL32Q9BYC8 188 aaKnown RBP16.33■□□□□ 0.2
LSM4-202ENST00000593564 SLC25A31Q9H0C2 315 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 KCNIP2Q9NS61 270 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 HHLA3Q9XRX5 114 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 FAT1Q14517 4588 aa16.33■□□□□ 0.2
LSM4-202ENST00000593564 HERC1Q15751 4861 aa16.32■□□□□ 0.2
LSM4-202ENST00000593564 MRPL23Q16540 153 aaKnown RBP16.32■□□□□ 0.2
LSM4-202ENST00000593564 LYPD5Q6UWN5 251 aa16.32■□□□□ 0.2
LSM4-202ENST00000593564 Q8TAT8 98 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms