RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NFYBP25208 207 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 PSMB8P28062 276 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 SDC2P34741 201 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 MEF2BQ02080 365 aaPredicted RBP3.19□□□□□ -1.9
SMAD4-216ENST00000593223 HSD52Q0P140 79 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 LCA10Q71F78 164 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 MARCH3Q86UD3 253 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 C10orf126Q8N4M7 172 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 SLC25A29Q8N8R3 303 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 OR2T10Q8NGZ9 312 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 FAM57AQ8TBR7 257 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 C7orf33Q8WU49 177 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 RAB2BQ8WUD1 216 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 C15orf40Q8WUR7 153 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 ITLN2Q8WWU7 325 aaPredicted RBP3.19□□□□□ -1.9
SMAD4-216ENST00000593223 CAMK2N2Q96S95 79 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 CBLN4Q9NTU7 201 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 ASF1BQ9NVP2 202 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 DYSFO75923 2080 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 POLEQ07864 2286 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 ZANQ9Y493 2812 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 NUMA1Q14980 2115 aa3.19□□□□□ -1.9
SMAD4-216ENST00000593223 LOC102724200A0A096LPH7 203 aaPredicted RBP3.18□□□□□ -1.9
SMAD4-216ENST00000593223 TRAV41A0A0B4J266 112 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 IGHV1-58A0A0C4DH39 117 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 SMIM31A0A1B0GVY4 71 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 ZNF670-ZNF695F2Z2N8 137 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 RTL8CO15255 209 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 PGLYRP1O75594 196 aaPredicted RBP3.18□□□□□ -1.9
SMAD4-216ENST00000593223 CST7O76096 145 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 KRASP01116 189 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 IGLV3-19P01714 112 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 MAS1P04201 325 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 IGHV4-34P06331 123 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 CD7P09564 240 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 LINC00869P0C866 280 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 BRS3P32247 399 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 RPL22P35268 128 aaKnown RBP3.18□□□□□ -1.9
SMAD4-216ENST00000593223 DAPP51397 102 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 AQP4P55087 323 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 ZNF141Q15928 474 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 TMEM183BQ1AE95 376 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 RPL22L1Q6P5R6 122 aaKnown RBP3.18□□□□□ -1.9
SMAD4-216ENST00000593223 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 CAMK2N1Q7Z7J9 78 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 ZGRF1Q86YA3 2104 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 ZDHHC22Q8N966 263 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 SUMF2Q8NBJ7 301 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 APCDD1LQ8NCL9 501 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 NPBQ8NG41 125 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 OR4K5Q8NGD3 323 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 OR10AC1Q8NH08 325 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 DEDD2Q8WXF8 326 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 SLC25A46Q96AG3 418 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 RBMXL1Q96E39 390 aaKnown RBP3.18□□□□□ -1.9
SMAD4-216ENST00000593223 C18orf15Q96N68 181 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 TAS2R8Q9NYW2 309 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 SNX12Q9UMY4 172 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 MPC1Q9Y5U8 109 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 HSPE1-MOB4S4R3N1 261 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 RP1P56715 2156 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 PLXNA2O75051 1894 aa3.18□□□□□ -1.9
SMAD4-216ENST00000593223 TAX1BP3O14907 124 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 OR2T1O43869 369 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 LGALS3P17931 250 aaKnown RBP3.17□□□□□ -1.9
SMAD4-216ENST00000593223 NUDT2P50583 147 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 RBM11P57052 281 aaKnown RBP3.17□□□□□ -1.9
SMAD4-216ENST00000593223 TPPP2P59282 170 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 CCL20P78556 96 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 PLGLB1Q02325 96 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 ATP5G2Q06055 141 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 LYPD2Q6UXB3 125 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 C16orf47Q6ZP98 133 aaPredicted RBP3.17□□□□□ -1.9
SMAD4-216ENST00000593223 LINC00305Q7Z4B0 112 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 TRAPPC6BQ86SZ2 158 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 GKN2Q86XP6 184 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 H1FXQ92522 213 aaKnown RBP3.17□□□□□ -1.9
SMAD4-216ENST00000593223 PEBP4Q96S96 227 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 GGTLC1Q9BX51 225 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 RPRMQ9NS64 109 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 MRPS16Q9Y3D3 137 aaKnown RBP3.17□□□□□ -1.9
SMAD4-216ENST00000593223 VWFP04275 2813 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 MYH6P13533 1939 aa3.17□□□□□ -1.9
SMAD4-216ENST00000593223 MYOFQ9NZM1 2061 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 ZNF638Q14966 1978 aaKnown RBP3.16□□□□□ -1.9
SMAD4-216ENST00000593223 C1orf196B1AJZ1 125 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 C9JCJ5 164 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 UBFD1O14562 309 aaKnown RBP3.16□□□□□ -1.9
SMAD4-216ENST00000593223 ZNF73O43830 326 aaPredicted RBP3.16□□□□□ -1.9
SMAD4-216ENST00000593223 SCO1O75880 301 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 TNFP01375 233 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 IGHV3-11P01762 117 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 HIST1H2BOP23527 126 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 HIST1H2BBP33778 126 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 ZNF93P35789 620 aaPredicted RBP3.16□□□□□ -1.9
SMAD4-216ENST00000593223 INSL3P51460 131 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 HIST1H2BDP58876 126 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 FGF12P61328 243 aa3.16□□□□□ -1.9
SMAD4-216ENST00000593223 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms