RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ATP5G1P05496 136 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 OR10J4P0C629 311 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 NBEAP1P0C6P0 100 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 ATP5G3P48201 142 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 CCDC28AQ8IWP9 274 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 FXYD5Q96DB9 178 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 PAXXQ9BUH6 204 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 AAMDCQ9H7C9 122 aa9.77□□□□□ -0.85
APOC1-208ENST00000592535 IGKV2-40A0A087WW87 121 aaPredicted RBP9.76□□□□□ -0.85
APOC1-208ENST00000592535 CBY3A6NI87 242 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 IGKV2D-40P01614 121 aaPredicted RBP9.76□□□□□ -0.85
APOC1-208ENST00000592535 FFAR4Q5NUL3 377 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 FAM122CQ6P4D5 195 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 C15orf53Q8NAA6 179 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 OR11H4Q8NGC9 324 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 ZNF503Q96F45 646 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 FAM19A4Q96LR4 140 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
APOC1-208ENST00000592535 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 C7orf71A4D174 169 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 KLLNB2CW77 178 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 SMLR1H3BR10 107 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 OR7C2O60412 319 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 IFNA5P01569 189 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 SLC25A5P05141 298 aaKnown RBP9.75□□□□□ -0.85
APOC1-208ENST00000592535 BTN1A1Q13410 526 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 C9orf47Q6ZRZ4 202 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 SCGB1C1Q8TD33 95 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 RNF141Q8WVD5 230 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 PHYHIPLQ96FC7 376 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 WFDC1Q9HC57 220 aa9.75□□□□□ -0.85
APOC1-208ENST00000592535 HMSDA8MTL9 139 aa9.74□□□□□ -0.85
APOC1-208ENST00000592535 RNF212Q495C1 297 aa9.74□□□□□ -0.85
APOC1-208ENST00000592535 LINC00612Q8N6U2 182 aa9.74□□□□□ -0.85
APOC1-208ENST00000592535 VGLL1Q99990 258 aa9.74□□□□□ -0.85
APOC1-208ENST00000592535 SNURFLB1AK76 121 aa9.73□□□□□ -0.85
APOC1-208ENST00000592535 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
APOC1-208ENST00000592535 EIF3GO75821 320 aaKnown RBP eCLIP9.73□□□□□ -0.85
APOC1-208ENST00000592535 CRISP2P16562 243 aa9.73□□□□□ -0.85
APOC1-208ENST00000592535 RNASE4P34096 147 aaKnown RBP9.73□□□□□ -0.85
APOC1-208ENST00000592535 UBE2L3P68036 154 aaKnown RBP9.73□□□□□ -0.85
APOC1-208ENST00000592535 LGALS9BQ3B8N2 356 aa9.73□□□□□ -0.85
APOC1-208ENST00000592535 TMEM78Q5T7P6 136 aa9.73□□□□□ -0.85
APOC1-208ENST00000592535 PRR9Q5T870 116 aa9.73□□□□□ -0.85
APOC1-208ENST00000592535 GAGE12BA1L429 117 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 GAGE7O76087 117 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 NUDT3O95989 172 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 GPX1P07203 203 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 GAGE12FP0CL80 117 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 GAGE12GP0CL81 117 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 GAGE12IP0CL82 117 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 RANP62826 216 aaKnown RBP9.72□□□□□ -0.85
APOC1-208ENST00000592535 KHDC3LQ587J8 217 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 HYLS1Q96M11 299 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 Q9H3A6 140 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 ZNF492Q9P255 531 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 TNFSF18Q9UNG2 199 aa9.72□□□□□ -0.85
APOC1-208ENST00000592535 RTL8CO15255 209 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 NMBP08949 121 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 TAS2R45P59539 299 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 ZFP69Q49AA0 526 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 Q6ZQT7 251 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 Q6ZR54 194 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 C11orf72Q8NBR9 251 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 Q8TAT8 98 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 ATG101Q9BSB4 218 aa9.71□□□□□ -0.86
APOC1-208ENST00000592535 HOXA5P20719 270 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 ZNF138P52744 262 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 RAB2AP61019 212 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
APOC1-208ENST00000592535 OR5I1Q13606 314 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 ACOT6Q3I5F7 207 aaPredicted RBP9.7□□□□□ -0.86
APOC1-208ENST00000592535 LGALSLQ3ZCW2 172 aaPredicted RBP9.7□□□□□ -0.86
APOC1-208ENST00000592535 Q6ZTI0 123 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 LYPD1Q8N2G4 141 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 EIF4E3Q8N5X7 224 aaKnown RBP9.7□□□□□ -0.86
APOC1-208ENST00000592535 ZNF680Q8NEM1 530 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 GSN-AS1Q9NRJ2 163 aa9.7□□□□□ -0.86
APOC1-208ENST00000592535 TRAV26-1A0A087WT03 109 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 RNF222A6NCQ9 220 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 M6PRP20645 277 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 CSN1S1P47710 185 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 ANXA2RQ3ZCQ2 193 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 AQP10Q96PS8 301 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 TMPRSS5Q9H3S3 457 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 TP53TG3Q9ULZ0 132 aa9.69□□□□□ -0.86
APOC1-208ENST00000592535 FXYD6-FXYD2A0A087WZ82 144 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 A0A0J9YY99 117 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 A0A1B0GVY2 172 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 A0A1W2PPV4 95 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 RBAKDNA6NC62 111 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 PRSS29PA6NIE9 313 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 RGS13O14921 159 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 FAM3BP58499 235 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms