RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 HTN3P15516 51 aa19.28■□□□□ 0.68
SMAD4-213ENST00000591914 TIMM8BQ9Y5J9 83 aaPredicted RBP19.28■□□□□ 0.68
SMAD4-213ENST00000591914 KLLNB2CW77 178 aa19.27■□□□□ 0.68
SMAD4-213ENST00000591914 DNAH6Q9C0G6 4158 aa19.26■□□□□ 0.67
SMAD4-213ENST00000591914 DEFB130BP0DP73 79 aa19.26■□□□□ 0.67
SMAD4-213ENST00000591914 DEFB130AP0DP74 79 aa19.26■□□□□ 0.67
SMAD4-213ENST00000591914 CRISP2P16562 243 aa19.26■□□□□ 0.67
SMAD4-213ENST00000591914 RAB2AP61019 212 aa19.26■□□□□ 0.67
SMAD4-213ENST00000591914 RANP62826 216 aaKnown RBP19.26■□□□□ 0.67
SMAD4-213ENST00000591914 VGLL1Q99990 258 aa19.26■□□□□ 0.67
SMAD4-213ENST00000591914 Q9H3A6 140 aa19.26■□□□□ 0.67
SMAD4-213ENST00000591914 C7orf71A4D174 169 aa19.25■□□□□ 0.67
SMAD4-213ENST00000591914 EIF3GO75821 320 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMAD4-213ENST00000591914 NMBP08949 121 aa19.25■□□□□ 0.67
SMAD4-213ENST00000591914 TMEM78Q5T7P6 136 aa19.25■□□□□ 0.67
SMAD4-213ENST00000591914 CCDC28AQ8IWP9 274 aa19.25■□□□□ 0.67
SMAD4-213ENST00000591914 OR2G3Q8NGZ4 309 aa19.25■□□□□ 0.67
SMAD4-213ENST00000591914 PYGO2Q9BRQ0 406 aa19.25■□□□□ 0.67
SMAD4-213ENST00000591914 A0A1W2PPV4 95 aa19.24■□□□□ 0.67
SMAD4-213ENST00000591914 HSD17B11Q8NBQ5 300 aa19.24■□□□□ 0.67
SMAD4-213ENST00000591914 NOP10Q9NPE3 64 aaKnown RBP19.24■□□□□ 0.67
SMAD4-213ENST00000591914 ZNF324O75467 553 aaPredicted RBP19.23■□□□□ 0.67
SMAD4-213ENST00000591914 P0DMU3 169 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 FAM231AP0DMU4 169 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 FAM231CP0DMU5 169 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 CD300CQ08708 224 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 PQLC2Q6ZP29 291 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 INO80EQ8NBZ0 244 aaPredicted RBP19.23■□□□□ 0.67
SMAD4-213ENST00000591914 OR10G4Q8NGN3 311 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 OR10G9Q8NGN4 311 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 OR10G7Q8NGN6 311 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 PSMG3Q9BT73 122 aaPredicted RBP19.23■□□□□ 0.67
SMAD4-213ENST00000591914 ZNF492Q9P255 531 aa19.23■□□□□ 0.67
SMAD4-213ENST00000591914 RBAKDNA6NC62 111 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 RNF222A6NCQ9 220 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 CSN1S1P47710 185 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 BTN1A1Q13410 526 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 TMEM88Q6PEY1 159 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 ZFAND2AQ8N6M9 145 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 OR2T35Q8NGX2 323 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 TNFSF18Q9UNG2 199 aa19.22■□□□□ 0.67
SMAD4-213ENST00000591914 CBY3A6NI87 242 aa19.21■□□□□ 0.67
SMAD4-213ENST00000591914 ATP6V0CP27449 155 aa19.21■□□□□ 0.67
SMAD4-213ENST00000591914 ZNF138P52744 262 aa19.21■□□□□ 0.67
SMAD4-213ENST00000591914 LINC00467Q9BRT7 94 aa19.21■□□□□ 0.67
SMAD4-213ENST00000591914 FXYD6-FXYD2A0A087WZ82 144 aa19.2■□□□□ 0.66
SMAD4-213ENST00000591914 TRBV7-9A0A0J9YWB2 115 aa19.2■□□□□ 0.66
SMAD4-213ENST00000591914 GPX1P07203 203 aa19.2■□□□□ 0.66
SMAD4-213ENST00000591914 RNASE4P34096 147 aaKnown RBP19.2■□□□□ 0.66
SMAD4-213ENST00000591914 FRAS1Q86XX4 4008 aa19.2■□□□□ 0.66
SMAD4-213ENST00000591914 G3V3Q6 166 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 ATP5G1P05496 136 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 ATP5G3P48201 142 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 PRR9Q5T870 116 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 LINC00612Q8N6U2 182 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 POM121L12Q8N7R1 296 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 RXFP4Q8TDU9 374 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 OTORQ9NRC9 128 aa19.19■□□□□ 0.66
SMAD4-213ENST00000591914 DIRC3C9JPN6 131 aa19.18■□□□□ 0.66
SMAD4-213ENST00000591914 CDC34P49427 236 aaPredicted RBP19.18■□□□□ 0.66
SMAD4-213ENST00000591914 SERF2P84101 59 aa19.18■□□□□ 0.66
SMAD4-213ENST00000591914 Q8TAT8 98 aa19.18■□□□□ 0.66
SMAD4-213ENST00000591914 SNURFLB1AK76 121 aa19.17■□□□□ 0.66
SMAD4-213ENST00000591914 HMGB3O15347 200 aaKnown RBP19.17■□□□□ 0.66
SMAD4-213ENST00000591914 SH3BGRL3Q9H299 93 aa19.17■□□□□ 0.66
SMAD4-213ENST00000591914 F5H768 121 aa19.16■□□□□ 0.66
SMAD4-213ENST00000591914 MBP02144 154 aa19.16■□□□□ 0.66
SMAD4-213ENST00000591914 STAG3L2P0CL84 134 aa19.16■□□□□ 0.66
SMAD4-213ENST00000591914 STAG3L3P0CL85 134 aa19.16■□□□□ 0.66
SMAD4-213ENST00000591914 ARL14EPLP0DKL9 152 aa19.16■□□□□ 0.66
SMAD4-213ENST00000591914 DAZ2Q13117 558 aaKnown RBP19.16■□□□□ 0.66
SMAD4-213ENST00000591914 RPL7L1Q6DKI1 246 aaKnown RBP19.16■□□□□ 0.66
SMAD4-213ENST00000591914 C15orf53Q8NAA6 179 aa19.16■□□□□ 0.66
SMAD4-213ENST00000591914 BIRC6Q9NR09 4857 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 PGPA6NDG6 321 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 ANXA2RQ3ZCQ2 193 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 FAM74A1Q5RGS3 127 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 EIF4E3Q8N5X7 224 aaKnown RBP19.15■□□□□ 0.66
SMAD4-213ENST00000591914 C11orf72Q8NBR9 251 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 ZNF680Q8NEM1 530 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 RAB24Q969Q5 203 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 HYLS1Q96M11 299 aa19.15■□□□□ 0.66
SMAD4-213ENST00000591914 BORCS7-ASMTA0A0B4J1R7 106 aa19.14■□□□□ 0.65
SMAD4-213ENST00000591914 ARL6IP6Q8N6S5 226 aa19.14■□□□□ 0.65
SMAD4-213ENST00000591914 GNPNAT1Q96EK6 184 aaPredicted RBP19.14■□□□□ 0.65
SMAD4-213ENST00000591914 LENEPQ9Y5L5 61 aa19.14■□□□□ 0.65
SMAD4-213ENST00000591914 Q6ZQT7 251 aa19.13■□□□□ 0.65
SMAD4-213ENST00000591914 CMTM2Q8TAZ6 248 aa19.13■□□□□ 0.65
SMAD4-213ENST00000591914 TMED6Q8WW62 240 aa19.13■□□□□ 0.65
SMAD4-213ENST00000591914 DNAH10Q8IVF4 4471 aa19.13■□□□□ 0.65
SMAD4-213ENST00000591914 SUN5Q8TC36 379 aa19.12■□□□□ 0.65
SMAD4-213ENST00000591914 GSN-AS1Q9NRJ2 163 aa19.12■□□□□ 0.65
SMAD4-213ENST00000591914 GAGE12BA1L429 117 aa19.11■□□□□ 0.65
SMAD4-213ENST00000591914 GAGE7O76087 117 aa19.11■□□□□ 0.65
SMAD4-213ENST00000591914 GAGE12FP0CL80 117 aa19.11■□□□□ 0.65
SMAD4-213ENST00000591914 GAGE12GP0CL81 117 aa19.11■□□□□ 0.65
SMAD4-213ENST00000591914 GAGE12IP0CL82 117 aa19.11■□□□□ 0.65
SMAD4-213ENST00000591914 RNF212Q495C1 297 aa19.11■□□□□ 0.65
SMAD4-213ENST00000591914 RGS13O14921 159 aa19.1■□□□□ 0.65
SMAD4-213ENST00000591914 GCHFRP30047 84 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms